LOCUS AK056459 3180 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31897 fis, clone NT2RP7004080, weakly similar
to CELL SURFACE GLYCOPROTEIN 1 PRECURSOR.
ACCESSION AK056459
VERSION AK056459.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3180)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3180
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7004080"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013073"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 592..1587
/codon_start=1
/protein_id="BAB71191.1"
/translation="MPDKTATPERPPAPENAPSSKKIPAPDKVPSPEKTLTLGDKASI
PGNSTSGKIPAPDKVPTPEKMVTPEDKASIPENSIIPEETLTVDEPSTPERVFSVEES
PALEAPPMDKVPNPKMAPLGDEAPTLEKVLTPELSEEEVSTRDDIQFHHFSSEEALQK
VKYFVAKEDPSSQEGAHTPEAPPPQPPSSERCLGEMKCTLVRGDSSPRQAELKSGPAS
RPALEKPHPHEEATTLPEEAPSNDERTPEEEAPPNEQRPLREEVLPKEGVASKEEVTL
KEELPPKEEVAPKEEVPPIERAFAQKNTSYQAASRLPRDARAPLAGPAKLHGKQE"
BASE COUNT 715 a 954 c 951 g 560 t
ORIGIN
1 ctctgactgg ggcgtccgac tggagctcag ccgcgcttgt ccggtgctag gtcatcctgc
61 caaacacccg aggccccaaa gatggtgcaa agtgaacttc agctacagcc cagagcaggc
121 ggacgagctg aagctgcaag ctggggagat cgtggaaatg ataaaggaga ttgaggacgg
181 ctggtggctg gggaagagga acgggcagct gggagccttc ccatccaact ttgtggaatt
241 gctggacagt gggcccccaa gccttggtaa cccagacatg ccttcagtca gccctggtcc
301 ccagcggcct cccaagacca cagaggataa gggctggtgg gaaggagagt gtcaaggacg
361 aagaggagtt tttccagaca actttgtact cccaccaccc ccaatcaaga agctggtccc
421 acggaaagtg gtatctcggg aatcagctcc tattaaggaa ccaaaaaagt tgatgcccaa
481 aacatccctc cccacagtca agaagctagc aacagccacc actgggccca gcaaagccaa
541 gaggaagagc acagcagccc ggtaaaggcc ccctctgtga agagaacccc catgccggac
601 aagactgcca ccccagagag gcccccagct ccagagaacg cccccagctc caagaagatc
661 ccggctcctg acaaagtccc ctccccagag aagaccctca ctctagggga caaggcctct
721 atcccaggga actccacctc ggggaagatc ccagctcctg acaaagtccc caccccagag
781 aagatggtga ctccggagga caaggcttct atcccagaga actccatcat cccagaggag
841 accctgactg tggacgaacc ctccactcca gagagggtct tttcagtgga agagtcccct
901 gccctagaag ccccacctat ggataaagtc cctaatccaa agatggcccc tctgggggat
961 gaggccccca ctctagaaaa ggtcttgacc ccagagcttt ctgaagaaga ggtgtccacc
1021 agagatgaca ttcaattcca tcacttctct tcggaggaag ccctgcagaa ggtcaagtac
1081 tttgtagcca aagaggatcc atcatcccag gagggggccc acacgccaga ggcaccccca
1141 ccccagcctc cttcctcaga gaggtgcctg ggagagatga aatgtaccct agttagaggg
1201 gacagctccc cacgccaggc tgagttgaag tctgggccag catccaggcc tgcccttgag
1261 aagccccacc cccacgaaga ggctacaacc cttccagagg aggcaccttc caatgacgag
1321 aggacccctg aagaggaggc gccccccaac gagcagaggc ctctgagaga ggaggtgctc
1381 cccaaagagg gagtggcttc caaagaggag gtgaccctga aagaggaatt gccccctaaa
1441 gaggaagtgg ctccaaaaga ggaggtgccc cccatagaaa gagcctttgc ccaaaaaaac
1501 acgtcctatc aagccgcctc cagactccca agagacgctc gcgctcccct cgctggtccc
1561 gcaaaactac acggaaaaca agaatgaagg agttgatgta acgtcgctga ggggcgaggt
1621 ggggtctcta aggagggcgc tggagctgat ggaggtgcag ctggagagga agctgaccga
1681 catctgggag gagctgaaga gcgagaagga gcagcgccgg cggctggagg tccaggtgat
1741 gcaggggacc cagaagtccc agaccccgcg cgtcatccac acgcagacgc agacctactg
1801 agggtgggcc tgggaaggga ccgcggcctg acctggctgg ggccacccac gtccttgcac
1861 acgactttgg gaaacgcgag aaatgtatga acccagggca ctgtggggac agggcgacgt
1921 gtgtccaggc gtttgccggt ccggctgccc ggtgcgccag atctcccgca ggatccgttc
1981 gcgctcctcc agccgctgcg cccgctccag ctcctccgcc gacgtgaaga cgttgacgtt
2041 gaggggcccg tccggctctg cggacagctc ggggcccggc agcgtgtcgt cggggcccag
2101 ccgagtcacc gtgtcctcct cgtcctcgtc gtcgtcctcg ggctccaggg tgctgctgcg
2161 ggggtcccgg cgctgagccg ggccccgggg ccgcgggcgg ggcgcccacg agatgctgat
2221 gacgagcagg cagaggatca agtaaacgga gtcttggaga gattgaattg actttaccaa
2281 aaccgtcagg atttgaatct gctgctctct gatcctaaag cctgagctag aaaccaccgc
2341 tccccctcct aggaggcccc ttccaggcaa agctgcttct cttccccaga cccatgctgg
2401 actggaaggg aggggactgt ccacccctcc ttccagggcc caggcttgaa tgtgtcccct
2461 ggccgagctc tggtctagtc acgcagggtt aatgattgtt ggactccagc tttgagccag
2521 ggcccggcca gcagtctcgc agaccccagc gtggggcctc tgtgcctgcg agctcctgcg
2581 ctcttgtgca ccaagcagct tgtggcggct tgtggcagat cccaccccat cccgtccccc
2641 accccaaggc taaacctgcc tgtgctcaca cacgcatttc ccacctgggc ttgtgcatgc
2701 aatgtggtgt gtgatcagtg tgtgtggcgg ggggcttcct tctgccctgt ctccacgggg
2761 cccccccatc atggacctcc cctcccttgc tggagctaga atgaggggga ggccgccttg
2821 gcgggagcct tagagaggag gaggaaaggg ggagaggaaa ttgcagacat agctgaaggc
2881 gctgcctgag gcctgtgggc cagcgaccct ctccctgtcc gggctgcaga cccctactcc
2941 cccagtcccg agactgggtt caagtagagg gcagatctag atgggggagg actaggactg
3001 actcctatgg ggatggaaaa gggactcctg ggtgtctttg tgactgttta gtgtgttctg
3061 tgaatgtgcg ggcaggtatt tttgcccaca tctgtatatt tgtctattaa tgtgatgtat
3121 ttgagtattg ttgtgggggc gggtatgtct gtatataaat ctgtgcagcc actagtcaac
//