LOCUS AK056448 3134 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31886 fis, clone NT2RP7003025, highly similar
to Synaptotagmin-6.
ACCESSION AK056448
VERSION AK056448.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3134)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3134
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7003025"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013062"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 233..1510
/codon_start=1
/note="highly similar to Synaptotagmin-6"
/protein_id="BAG51713.1"
/translation="MPWRNKEASSPSSANPPLEALQSPSFRGNMADKLKDPSTLGFLE
AAVKISHTSPDIPAEVQMSVKEHIMRHTRLQRQTTEPASSTRHTSFKRHLPRQMHVSS
VDYGNELPPAAEQPTSIGRIKPELYKQKSVDGEDAKSEATKSCGKINFSLRYDYETET
LIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHFPVP
YEELADRKLHLSVFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWKDIQYATSESVD
LGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTI
KKNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGITAEGLGRD
HWNEMLAYPRKPIAHWHSLVEVKKSFKEGNPRL"
BASE COUNT 799 a 783 c 777 g 775 t
ORIGIN
1 aaggaccagg acgccggggt tccaggagac tctgcaggct ccatccctcc ttattccccc
61 accccgaccc cagtagcgct gggcctagga gcactcggga gttgctcagt ggctctgcac
121 cgctggcgcg ggaaggggag aaaggggctg ccagaggcgg gaatttggtc cccacgcgct
181 gctccaggga cgagaagcca gggaccggcg gttctgggag cagctgtgct ggatgccctg
241 gaggaacaag gaggcctcca gtccctcttc tgctaatccc cccttggaag ccctccagag
301 ccccagcttc agaggcaaca tggcggacaa gctgaaggac cccagcaccc tgggcttcct
361 ggaggcggcc gtgaagatca gccacacgtc cccagatatc ccagctgagg tgcagatgtc
421 ggtcaaggag cacatcatgc gtcacacccg gctgcagcgg caaactacag agccagcgtc
481 atccaccagg cacacgtcct tcaagcgcca cctgccaagg cagatgcatg tctccagtgt
541 agactatggc aatgagcttc caccagcagc agagcagccc accagcattg gccgcatcaa
601 gcctgagctc tacaagcaga agtcggtgga tggggaggat gccaagtctg aggccaccaa
661 gagctgcggg aagatcaact tcagcctacg ctacgattac gagaccgaga ccctgattgt
721 gcgtatcctg aaggcttttg acctccctgc caaggacttt tgtggaagct ctgaccctta
781 tgtcaagatc tacctcctgc ctgaccgcaa atgcaagctg cagacccggg tgcaccgcaa
841 gaccctgaac cccacctttg atgagaactt ccacttccct gtgccctatg aggagctggc
901 tgaccgcaag ctgcatctca gtgtcttcga ctttgaccgc ttctcccgcc atgacatgat
961 tggcgaggtc atcctggaca acctctttga ggcctctgac ctgtctcggg aaacctccat
1021 ctggaaggat atccaatatg ccacaagtga aagcgtggac ttgggagaga tcatgttctc
1081 cctttgctac ctgcccactg caggcaggct caccctcaca gtgattaagt gtcggaacct
1141 caaggcgatg gacatcacag gctattcaga tccctatgtg aaagtgtcct tgctctgtga
1201 tgggcggagg ctgaagaaga agaaaacaac cataaagaaa aacactctca atcctgtcta
1261 caatgaggcc atcatctttg acattccccc ggaaaacatg gatcaagtca gcctgctcat
1321 ctcagtcatg gactatgatc gagtgggcca caatgagatc ataggagtct gtcgtgtggg
1381 gatcactgct gaaggcctgg gaagggacca ctggaacgag atgctggcat acccccggaa
1441 gcccatcgca cactggcact ccttggtgga ggtaaagaaa tccttcaaag agggaaaccc
1501 tcggttgtga tttcattcac gtggatgctg caagcagaga gactgccacc tggagttagg
1561 atggcagggc cgagctgcta gcttcgacag tgagagctcg tgcccatctc cgaaaccact
1621 tccaacacca tgagatgtgc agccaaataa cacaaatggg actcagcaat gttctctttg
1681 cacttgttca accgtctaaa cagtgttgtg cagtcgcagt ggcggcagca gcggcagccg
1741 tccgtcactc cagagtctta cctgctcctg tgtaggtcaa agctgagaca cttgtcatgt
1801 ggtcagatct gtcttagtct tttgtgtctc ccaaggtgat gtttttgtgg tttttcactt
1861 tttatgagtc tgctggtaag aaaagggaaa aaaaaaaaag agtaggaaaa gacaaagggt
1921 ggaaagccca gaagttggtt ctagaaaata caaggtacag ttttttggaa agaggtggat
1981 tgagtttctg aaatgctgcg tctccagcaa gctccacaac cctggaaaag gaggaggcgt
2041 ggtgggactg cggctgcatt ttcagtgccc tgcaggaatg gggtgaatcc atggaagagc
2101 ctttgtgagg tgaattacta gtctttgaag ctcttcgctg gcaggacata aaccacgctg
2161 ggaccctcag tcccgtgttg aaatcacaag acctctgagg cgcttgtgag ccttcagctg
2221 atgtgcaggg ttcctcgctc cccttcctcg ctggctttcc ccatgaattg aaaacgtctt
2281 gattcctcat gggaacttag tcactttctt taggaatgat tcagttcagc cgaaactaaa
2341 cacgccatat gttttccgat gcgccacagt taatgatcac atttgtttga aaacaggatc
2401 tttgtcctca gaaataatct tgattgtaaa gtaagagaga aacatatgtt ctggaatgat
2461 ttctgcatta tacatagctt tataattcca tgaagtatca agctgctgtt taaaatgcct
2521 aaacagatta aagaaaaacc tagattaaat gttcttttcc aaatggggag ttttgaaatc
2581 caaatagcag tttgagtcca tctttctatg aagagtatgt ttttgattga aaccgagtca
2641 gcgtaagcct atttcagccc ctttggctct ttgacaatat tcatcttaaa ctttagttct
2701 ataaattact aagtacttca gtgttgtttg tttcagtggt tgtgagggtt tcttgtttcc
2761 tttagatctt taccttaggc caaactcagt ttaggaaaaa aaaaattgtt tgaactattc
2821 tgtgttgtaa tagcacattt ctgttgagtt aatagtggtc ttcccaccaa cccctaaaac
2881 caggttgatt tgctcaatct cagtttgtat aaccccagta agcgcatgga ggtgagtttc
2941 tacttcgact tgtggcgaca cagtgccagt ttcctgagct gtgtgtacta cttgcaagag
3001 gcaagtctgc tgaagaaccc cttcttttaa cagtggaaaa tcaagaacag aaaatctgtt
3061 cacacacctg tgtcttattc tttatatatg ctacatggta gaggagcagc gaccaataaa
3121 gtatccctca tttt
//