LOCUS AK056424 3044 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31862 fis, clone NT2RP7001335.
ACCESSION AK056424
VERSION AK056424.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3044)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3044
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7001335"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013038"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 396..2096
/codon_start=1
/protein_id="BAG51705.1"
/translation="MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQ
PRPFGVPVSVDKDVHIPFTNGSYTFASMYHRQGGVPGTFANRDFPPSLLHLHPQFAPP
NLDCTPISMLNHSGVGAFRPFASTEDRESYQSAFTPAKRLKNCHDTESPHLRFSDADG
KEYDFGTQLPSSSPGSLKVDDTGKKIFAVSGLISDREASSSPEDRNDRCKKKAAALFD
SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSSKNSLLKDAMAPGTPKSLLLSASI
EREGESPTASPHSSATDDLHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREG
SCMAEDDAVDIEHENNNRFEEYEWCGQKRIRATTLLEGGFRGSGFIMCSGKENPDSDA
DLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGPPSTRITPEFS
KWASDEMPSTSNGESSKQEAMQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSR
GDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITAPGDLRRIYL
"
BASE COUNT 679 a 906 c 795 g 664 t
ORIGIN
1 attcactgat tagatccagc gctgagaggc agcactgctc cttctctcac gccaactgag
61 tctcttgatc tgtacatgca atcccaggca gctcgcgaac acaaacccgg ggccagccgc
121 ctactgctgc tgctgctgct gctgctgccg ctgccgccgc cgccgccgcc gctgcctccg
181 ccggctctgc gaacccggga cttttcatgc accacactct ccgcctgctt ccctccgtgt
241 cctgaaaagt gcgaccgttc tcccaaggaa tttccacggt cttaggaggg aatgattccc
301 cagtaatatt ccctgccctg acccaaagtg ctggttggcc tccctcccag ggaagactgc
361 ttcttgcgta acgccggcca cagaaagaga ctccgatgga cttacaccgg gcagccttca
421 agatggagaa ctcatcctac cttcccaacc ctctggcatc cccagcactg atggtcctgg
481 catccacggc tgaggccagc cgtgatgctt ccatcccttg tcagcagcca cgaccctttg
541 gtgtacctgt ctcagttgac aaggacgtgc atattccttt caccaacggt tcctatacct
601 ttgcctctat gtaccatcgg caaggtgggg tgccaggcac ttttgccaat cgtgatttcc
661 ccccttctct actacacctc caccctcaat ttgctccccc aaatctagat tgcaccccaa
721 tcagtatgct gaatcatagt ggtgtggggg ctttccggcc ctttgcctcc accgaggacc
781 gggagagcta tcagtcagcc tttacgccgg ccaagcgact taagaactgc catgacacag
841 agtctcccca cttgcgcttc tcagatgcag atggcaagga atatgacttt gggacacagc
901 tgccatctag ctcccccggt tcactaaagg ttgatgacac tgggaagaag atttttgctg
961 tctctggcct catttctgat cgggaagcct catctagccc agaggatcgg aatgacagat
1021 gtaagaagaa agcagcggca ttgttcgaca gccaggcccc aatttgcccc atctgccagg
1081 tcctgctgag gcccagtgag ctgcaggagc atatggagca ggaactggag cagctagccc
1141 aactgccctc gagcaagaat tcccttctga aggatgccat ggctccaggc accccaaagt
1201 ccctcctgtt gtctgcttcc atcgagaggg aaggagagtc tccaacggca tcaccccact
1261 catctgccac cgatgacctc caccattcag acagatacca gacctttctg cgagtacgag
1321 ccaaccggca gacccgactg aatgctcgga ttgggaaaat gaaacggagg aagcaagatg
1381 aagggcagag ggaaggctcc tgcatggctg aggatgatgc tgtggacatc gagcatgaga
1441 acaacaaccg ctttgaggag tatgagtggt gtggacagaa gcggatacgg gccaccactc
1501 tcctggaagg tggcttccga ggctctggct tcatcatgtg cagcggcaaa gagaacccgg
1561 acagtgatgc tgacttggat gtggatgggg atgacactct ggagtatggg aagccacaat
1621 acacagaggc tgatgtcatc ccctgcacag gcgaggagcc tggtgaagcc aaggagagag
1681 aggcacttcg gggcgcagtc ctaaatggcg gccctcccag cacgcgcatc acacctgagt
1741 tctctaaatg ggccagtgat gagatgccat ccaccagcaa tggtgaaagc agcaagcagg
1801 aggccatgca gaagacctgc aagaacagcg acatcgagaa aatcaccgaa gattcagctg
1861 tgaccacgtt tgaggctctg aaggctcggg tcagagaact tgaacggcag ctatctcgtg
1921 gggaccgtta caaatgcctc atctgcatgg actcgtactc gatgccccta acgtccatcc
1981 agtgttggca cgtgcactgc gaggagtgct ggctgcggac cctgggtgcc aagaagctct
2041 gccctcagtg caacacgatc acagcgcccg gagacctgcg gaggatctac ttgtgagcta
2101 tctgccccag gcaggcctcg cctccagcag ccccacctgc ccccagcctc tgtgacagtg
2161 accgtctccc tttgtacata cttgcacaca ggttccccat gtacatacat gcacatactc
2221 aaacatgcgt acacacacac acatttacac acgcaggact ctggagccag agtagaggct
2281 gtggcccagg cactacctgc tggctcccac ctatggtttg ggggccatac ccgttccagc
2341 tctgttccca gggtggggca gggaggtggg ggttggggga gtagtggggc acggctccta
2401 agatccagcc cccatactga cagacggacg gacagacatg caaacaccag actgaagcac
2461 atgtaatata gaccgtgtat gtttacaatg ttgtgtataa atgggacaac tcctcgccct
2521 ctacctgtcc cctccccctt tggttgtatg attttcttct cttttaagaa cccctggaag
2581 cagcgcctcc ttcagggttg gctgggagct cggcccatcc acctcttggg gtacctgcct
2641 ctctctctcc tgtggtgtcc cttccctctc ccatgtgctc ggtgttcagt ggtgtatatt
2701 tcttctccca gacatggggc acacgcccca agggacatga tcctctcctt agtcttagct
2761 catggggctc tttataagga gttggggggt agaggcagga aatgggaacc gagctgaagc
2821 agaggctgag ttagggggct agaggacagt gctcctggcc acccagcctc tgctgagaac
2881 cattcctggg attagagctg cctttcccag ggaaaaagtg tcgtctcccc gaccctcccg
2941 tgggccctgt ggtgtgatgc tgtgtctgta tattctatac aaaggtactt gtcctttccc
3001 tttgtaaact acatttgaca tggattaaac cagtataaac agtt
//