LOCUS AK056328 2250 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31766 fis, clone NT2RI2007879, weakly similar
to HOMEOBOX PROTEIN HOX-A4.
ACCESSION AK056328
VERSION AK056328.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2250)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2250
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2007879"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012942"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 391..1020
/codon_start=1
/protein_id="BAB71152.1"
/translation="MASRGLSLFPESCPDFCCGTCDDQYCCSDVLKKFVWSEERCAVP
EASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLSVVTIIICFTCSCC
CLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPY
PMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL"
BASE COUNT 388 a 690 c 649 g 523 t
ORIGIN
1 agtcctggcc cactgcgcca gcgctgagcc tgccagggct ggggctgggg atcaccttgg
61 gatgatggtg tcagtcccag ggggcaggag atcgagtgtc ctctgagctg gcgactgggc
121 ctgtagaagg gaaccggcat ttgtggagtg tctactgagt gccaaggtct gcgctgggca
181 ctgtcctcgc accgcctcac ctagtcctca cgtagccctc gggcaagtga ggatccgccg
241 ggactgcggc tgggagggat ggctgtggct gtcccccagc ccacacagta ggcgctcagt
301 gtcagggtgc atattcccgg ggacgccctc caggcctgag agctgggggc cgccgccgcc
361 ccccatgcat ccggacgtgg tgaggtgtgt atggcttccc gtggactcag cctcttcccc
421 gagtcctgtc cagatttctg ctgtggtacc tgtgatgacc aatactgctg ctctgacgtg
481 ctgaagaaat ttgtgtggag cgaggaaagg tgtgctgtgc ctgaggccag cgtgcctgcc
541 agtgtagagc cggtggagca gctgggctcg gcgctgaggt ttcgccctgg ctacaacgac
601 cccatgtcag ggttcggagc gaccttggcc gttggcctga ccatctttgt gctgtctgtc
661 gtcactatca tcatctgctt cacctgctcc tgctgctgcc tttacaagac gtgccgccga
721 ccacgtccgg ttgtcaccac caccacatcc accactgtgg tgcatgcccc ttatcctcag
781 cctccaagtg tgccgcccag ctaccctgga ccaagctacc agggctacca caccatgccg
841 cctcagccag ggatgccagc agcaccctac ccaatgcagt acccaccacc ttacccagcc
901 cagcccatgg gcccaccggc ctaccacgag accctggctg gaggagcagc cgcgccctac
961 cccgccagcc agcctcctta caacccggcc tacatggatg ccccgaaggc ggccctctga
1021 gcattccctg gcctctctgg ctgccacttg gttatgttgt gtgtgtgcgt gagtggtgtg
1081 caggcgcggt tccttacgcc ccatgtgtgc tgtgtgtgtc caggcacggt tccttacgcc
1141 ccatgtgtgc tgtgtgtgtc ctgcctgtat atgtggcttc ctctgatgct gacaaggtgg
1201 ggaacaatcc ttgccagagt gggctgggac cagactttgt tctcttcctc acctgaaatt
1261 atgcttccta aaatctcaag ccaaactcaa agaatggggt ggtggggggc accctgtgag
1321 gtggcccctg agaggtgggg gcctctccag ggcacatctg gagttcttct ccagcttacc
1381 ctagggtgac caagtagggc ctgtcacacc agggtggcgc agctttctgt gtgatgcaga
1441 tgtgtcctgg tttcggcagc gtagccagct gctgcttgag gccatggctc gtccccggag
1501 ttgggggtac ccgttgcaga gccagggaca tgatgcaggc gaagcttggg atctggccaa
1561 gttggacttt gatcctttgg gcagatgtcc cattgctccc tggagcctgt catgcctgtt
1621 ggggatcagg cagcctcctg atgccagaac acctcaggca gagccctact cagctgtacc
1681 tgtctgcctg gactgtcccc tgtccccgca tctcccctgg gaccagctgg agggccacat
1741 gcacacacag cctagctgcc cccagggagc tctgctgccc ttgctggccc tgcccttccc
1801 acaggtgagc agggctcctg tccaccagca cactcagttc tcttccctgc agtgttttca
1861 ttttatttta gccaaacatt ttgcctgttt tctgtttcaa acatgatagt tgatatgaga
1921 ctgaaacccc tgggttgtgg agggaaattg gctcagagat ggacaacctg gcaactgtga
1981 gtccctgctt cccgacacca gcctcatgga atatgcaaca actcctgtac cccagtccac
2041 ggtgttctgg cagcagggac acctgggcca atgggccatc tggaccaaag gtggggtgtg
2101 gggccctgga tggcagctct ggcccagaca tgaatacctc gtgttcctcc tccctctatt
2161 actgtttcac cagagctgtc ttagctcaaa tctgttgtgt ttctgagtct agggtctgta
2221 cacttgttta taataaatgc aatcgtttgg
//