LOCUS AK056294 2209 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31732 fis, clone NT2RI2006856, highly similar
to Striatin-4.
ACCESSION AK056294
VERSION AK056294.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2209)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2209
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2006856"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012908"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 220..1317
/codon_start=1
/note="highly similar to Striatin-4"
/protein_id="BAG51668.1"
/translation="MDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKF
TLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAH
RGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVW
GLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHI
VASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFL
DNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRK
KHEEAIHAVACHPSKALIASAGADALAKVFV"
BASE COUNT 398 a 750 c 620 g 441 t
ORIGIN
1 atcaatgagt ttgatttcct gggctcagga gaggatgggg aaggggctcc agaccctcgg
61 cggtgcactg tggatgggag cccccatgag ctggaaagcc gtcgggtcaa actccaaggc
121 attctggctg acctgcggga tgtggatggg ctgcccccaa gagtgactgg cccgcctcct
181 ggcacacccc agccccggcc acatgaagac gtcttcatca tggacactat cgggggcggg
241 gaggtgagcc tgggggactt ggcagatctc accgtcacca acgacaacga cctcagctgc
301 gatctgtctg acagcaaaga tgcttttaag aagacgtgga accccaagtt caccctgcgc
361 tcgcactacg acggcattcg ttccctggcc ttccaccaca gccagtcggc tctgctcacc
421 gcctccgagg acggcacgct caagctctgg aacctgcaga aggcggtcac ggccaagaag
481 aatgcggcgc tagatgtgga acctatacat gctttccggg ctcacagggg cccagtgttg
541 gctgtggcta tgggcagcaa cagtgaatac tgctacagtg gcggggcaga tgcctgcatc
601 catagttgga agattccaga cctcagcatg gatccctatg atggctacga cccaagcgtg
661 ctgagccacg tcctggaggg ccacggggac gccgtgtggg gcctggcctt cagtcccacc
721 tcccagcgcc tggcctcctg ttctgctgat ggcaccgtcc gcatctggga ccccagcagc
781 agcagcccgg cctgcctctg caccttcccc acagccagcg agcacggggt ccccacctca
841 gtggccttca ccagcaccga gcctgcccac atcgtggcct ccttccgctc tggcgacacc
901 gtcttgtatg acatggaggt tggcagtgcc ctcctcacgc tggagtcccg gggcagcagc
961 ggtccaaccc agatcaacca agtggtgagt catccaaacc agcctctcac catcaccgcc
1021 cacgacgaca ggggcatccg cttcctggac aatcggacag gtaagccggt gcactccatg
1081 gttgcacacc tggacgcagt cacctgccta gccgtggacc ccaacggcgc attcctgatg
1141 tcaggaagcc atgactgctc cctgcgtctc tggagcctgg acaacaaaac gtgcgtgcag
1201 gagatcacgg cccaccgcaa gaagcacgag gaggccatcc acgctgttgc ctgccacccc
1261 agcaaggccc tcattgccag tgctggcgct gatgccctgg ccaaggtctt cgtatgatgc
1321 ccacctggcc ctgccctggc cgccacgctg gctggggtgt agggccgggc aggtggggct
1381 gaggggactc ccagcctcgc tggaggtgca gaggcctggc ctctgtctgt ttgccgtgga
1441 gcctggtggt gctaacggcc ctttccccag gaatccctcc ccaacggctg ccttccccaa
1501 gcatccagcc tggggatggg cccctttcag gaatcacccc cgaggatggc ctcggggttt
1561 ccccctgtgc cctgacagcc gctcctggta tcagagctgc tttccagagg gcagcacagc
1621 cagggccggg tgtctttagg gatcagtttt tccaagactc cagaaggtgc caggttctcc
1681 ccttgagctc ctgctccccc atcccccatc ctcccagacc tgggcaggag ctgtgctggg
1741 agaaagggtg gcagccggga gcctcagagc tgagccccgg cctggctgcc cctcccctcc
1801 ggccctctcc actgctttcc agacactaac caaggcttcc aggccaggga ttgcccaaca
1861 ctcctagggc agccctccca gcgccccatg gggtcgccca tgggtagaga cggctttctt
1921 gtgcccctcc ctggggcatg gagggtggag tgggcctcgg gtccccctga actccctgta
1981 tatctgtata aataacggga ttttcatggc gccgccccac ccgcattatc actgtgtgat
2041 ggtctcagtc agtctcctcc ctgtctccac tctttccctc tatttatttc actctcttgt
2101 ttggttctac cctgcaccct cggtcccctt ccaggttcct gtttataagc cccaacccct
2161 ctgtccccat cttgtatgtg aaaacttgtc tcaataaacc ctttggagt
//