LOCUS AK056247 2430 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31685 fis, clone NT2RI2005368, highly similar
to Homo sapiens zinc finger protein 608 (ZNF608), mRNA.
ACCESSION AK056247
VERSION AK056247.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2430)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2430
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2005368"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012861"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 310..>2430
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
608 (ZNF608), mRNA"
/protein_id="BAG51658.1"
/translation="MSVNISTAGKGVDPNTVDTYDSGDDWEIGVGNLIIDLDADLEKD
RQKFEMNNSTTTTSSSNSKDCGGPASSGAGATAALADGLKFASVQASAPQGNSHKETS
KSKVKRSKTSKDANKSLPSAALYGIPEISSTGKRQEVQGRPGEATGMNSALGQSVSSG
GSGNPNSNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAGKSRKDKHDLL
QGHQNGSGSQAPSGGHLYGFGAKSNGGGASPFHCGGTGSGSVAAAGEVSKSAPDSGLM
GNSMLVKKEEEEEESHRRIKKLKTEKVDPLFTVPAPPPPISSSLTPQILPSYFSPSSS
NIAAPVEQLLVRTRSVGVNTCEVGVVTEPECLGPCEPGTSVNLEGIVWHETEEGVLVV
NVTWRNKTYVGTLLDCTKHDWAPPRFCESPTSDLEMRGGRGRGKRARSAAAAPGSEAS
FTESRGLQNKNRGGANGKGRRGSLNASGRRTPPNCAAEDIKASPSSTNKRKNKPPMEL
DLNSSSEDNKPGKRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLIDCPHPNCNKKYKH
INGLRYHQAHAHLDPENKLEFEPDSEDKISDCEEGLSNVALECSEPSTSVSAYDQLKA
PASPGAGNPPGTPKGKRELMSNGPGSIIGAKAGKNSGKKKGLNNELNNLPVISNMTAA
LDSCSAADGSLAAEMPKLEAEGLID"
BASE COUNT 687 a 566 c 696 g 481 t
ORIGIN
1 atttggtttc ttccttcttg atcatttggt gtttaagtaa aatgaggcac aggcttgttt
61 gccgagtgga gtgggaaagg cattttgatt tgctggccta attaaaaaat gataaaggat
121 taaaaggaaa aggtggacct ggactgaggg tgtaaaatcc ctggacacat tcgtggggca
181 ggaaaaagaa gaggaagatt agaagatttt ttttttcttt gagagaaagc ccagcggaga
241 taaacgaatg tcccctcatc tccaaagaaa agttcatcgg atttttattc tagagagctc
301 atcttcagga tgtcagtgaa catttctact gcaggaaaag gtgtggatcc aaatacagtt
361 gatacttatg acagtggcga tgattgggaa atcggggttg gaaatttaat aattgatttg
421 gacgctgatt tggagaagga cagacagaaa tttgagatga ataattccac caccaccact
481 agtagcagca actccaagga ttgtggaggt ccggcctcca gtggggctgg tgctaccgca
541 gccttagctg atggcctaaa atttgcttct gttcaggcct ctgctcccca ggggaattca
601 cacaaagaga ccagcaaatc aaaagtgaaa aggagtaaaa cttctaagga tgctaataaa
661 tctctgcctt ctgctgcctt gtatgggatt cccgagatca gcagcactgg caagaggcag
721 gaagtccaag ggcgccctgg agaggcaact ggcatgaatt cagcgctggg tcaaagtgtg
781 agcagcggcg gcagcggcaa cccaaacagc aatagtacca gcaccagcac ctctgccgcc
841 accgcggggg caggctcctg tgggaaaagc aaagaggaga agccaggtaa aagccagagc
901 agccgaggcg ccaagcggga taaggatgcg gggaaatcca ggaaggacaa gcacgacctg
961 cttcagggcc accagaatgg cagtggcagc caggcccctt ccggggggca cctctatggc
1021 tttggggcca agagcaatgg aggtggcgcg agccccttcc actgcggggg cactgggagt
1081 ggcagcgtcg ccgctgcagg ggaagttagc aaaagtgccc cggattcagg gctcatggga
1141 aactctatgt tggtaaagaa ggaagaggag gaggaggaga gccacaggcg aatcaagaaa
1201 ctgaaaactg agaaggttga ccccctgttt acagtgccag cgccaccacc gccgatttcc
1261 agcagtctca cgcctcagat tctaccctcc tacttttccc catcttcatc caatattgca
1321 gcaccggttg aacagctttt ggttcggact cgttctgtgg gtgtcaatac atgtgaagtt
1381 ggagtagtga cagagccaga gtgtcttggg ccctgtgaac ctgggaccag tgtgaatttg
1441 gaagggatcg tgtggcatga aacagaagaa ggtgtcctag tggtcaatgt cacgtggagg
1501 aacaaaacgt acgtgggaac cctactggac tgcaccaagc acgactgggc ccctcccagg
1561 ttttgtgagt caccgacaag tgacctggag atgagagggg gccggggcag agggaagaga
1621 gcgaggtctg ctgctgccgc cccgggctcc gaggccagct tcacagagtc cagagggctg
1681 cagaataaga acagaggggg ggccaatggg aaagggaggc ggggcagcct caatgccagc
1741 ggacgaagga cacccccaaa ttgtgctgct gaggatatca aagccagccc ttcctccacc
1801 aacaaaagga aaaacaagcc tccaatggag ctggacctga actccagctc tgaggacaat
1861 aagcctggaa agcgtgtccg cacaaattcc agaagcactc ccactacccc tcaagggaaa
1921 ccagagacta cttttttgga ccaaggctgc tcttctccag tgttaatcga ctgtccccac
1981 ccaaactgca acaaaaagta caagcacatt aacggcctga ggtaccacca ggctcatgca
2041 cacttagacc cagaaaacaa gctggagttc gagcctgaca gtgaggacaa gatctcggac
2101 tgtgaggaag gattgagtaa tgtggcactt gaatgcagtg agccaagcac aagtgtatct
2161 gcttatgacc agttgaaggc accggcatcc cctggtgctg gaaacccacc tgggacccca
2221 aagggaaaga gagagctgat gagcaatggc ccaggttcca ttattggtgc taaagctggg
2281 aagaattctg gcaaaaagaa gggccttaac aatgaactga acaaccttcc agtaatctcc
2341 aacatgacgg ctgcgttaga cagttgctcg gcagcagacg gcagtttggc tgctgagatg
2401 cctaaactgg aagcagaagg attaattgac
//