LOCUS AK056244 2491 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31682 fis, clone NT2RI2005335, highly similar
to MMS19-like protein.
ACCESSION AK056244
VERSION AK056244.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2491)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2491
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2005335"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012858"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 128..2125
/codon_start=1
/note="highly similar to MMS19-like protein"
/protein_id="BAG51657.1"
/translation="MKLVWPSAKLLQAAAGASARACDSVTSNVLPLLLEQFHKHSQSS
QRRTILEMLLGFLKLQQKWSYEDKDQRPLNGFKDQLCSLVFMALTDPSTQLQLVGIRT
LTVLGARPDLLSYEDLELAVGHLYRLSFLKEDSQSWVAALEASGTLAALYPVAFSSHL
VPKLAEELRVGESNLTNGDEPTQCSRHLCCLQALSAVSTHPSIVKETLPLLLQHLWQV
NRGNMVAQSSDVIAVCQSLRQMAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKEP
SVLRKVLLEDEVLAAMVSVIGTATTHLSPELAAQSVTHIVPLFLDGNVSFLPENSFPS
RFQPFQDGSSGQRRLIALLMAFVCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAA
AKCFAGLLNKHPAGQQLDEFLQLAVDKVEAGLDSGPCRSQAFTLLLWVTKALVLRYHP
LSSCLTARLMGLLSDPELGPAAADGFSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNV
PALVQGFHAAPQDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDCVVQL
STLSCLQPLLLEAPQVMSLHVDTLVTKFLNLSSSPSMAVRIAALQCMHALTRLPTPVL
LPYKPQVIRALAKPLDDKKRLVRKEAVSARGEWFLLGSPGS"
BASE COUNT 525 a 706 c 651 g 609 t
ORIGIN
1 ggcggccctc cactccctga ctgcgtgttt gtctcgctct gtgctgaggg ctgatgctga
61 ggacctcctt gactccttcc ttagcaacat tctacaggac tgcaggcacc acctgtgtga
121 accggacatg aaactggtgt ggcctagtgc caagctgttg caggcagctg caggtgcatc
181 tgcccgggcc tgtgactctg tcaccagcaa tgtactgcct ttactgctgg aacagttcca
241 caagcacagt cagagcagcc agcggcggac aatccttgaa atgctcctgg gtttcttgaa
301 gctgcagcag aaatggagct atgaagacaa agatcaaagg cctctgaatg gcttcaagga
361 ccagctgtgc tcactggtat tcatggctct aacagacccc agcacccagc ttcagcttgt
421 tggcatccgt acactgacag tcttgggtgc ccggccagat ctcctatctt atgaggactt
481 ggagctggca gtgggtcacc tgtacagact gagcttcctg aaggaggatt cccagagttg
541 ggtggcagca ctggaagcat caggaaccct ggctgctctc taccctgtgg ccttcagcag
601 ccacctcgta cccaagctcg ctgaggagct gcgtgtaggg gagtcaaatt tgactaacgg
661 agatgagccc acccaatgct cccggcatct gtgctgtctg caagccttgt cagctgtatc
721 aacacatccc agcatcgtca aggagacact gcctctgctg ctgcagcatc tctggcaagt
781 gaacagaggg aatatggttg cacaatccag tgacgttatt gctgtctgtc agagcctcag
841 acagatggca gaaaaatgtc agcaggaccc tgagagttgc tggtatttcc accagacagc
901 tataccttgc ctgcttgcct tggctgtgca ggcctctatg ccagagaagg agccctcagt
961 tctgagaaaa gtactattgg aggatgaggt gttggctgcc atggtgtctg tcattggcac
1021 tgctacaacc cacctgagcc ctgagttagc tgcccagagt gtgacacaca ttgtgcccct
1081 cttcttggat ggcaacgtgt cctttctgcc tgaaaacagc ttcccgagca gattccagcc
1141 attccaggat ggctcctcag ggcagaggcg gctgattgca ctgcttatgg cctttgtctg
1201 ctccctgcct cgaaatgtgg aaatccctca gctgaaccaa ctcatgcggg agcttttgga
1261 actgagctgc tgccacagct gccccttttc ttccaccgct gctgccaagt gctttgcagg
1321 actcctcaac aagcaccctg cagggcagca gctggatgaa ttcctacagc tagctgtgga
1381 caaagtggag gctggcctgg actctgggcc ctgtcgtagt caggccttca ctcttcttct
1441 ctgggtaaca aaggccctag tgctcagata ccatcctctc agctcctgcc ttacagcccg
1501 gctcatgggc ctcctgagtg acccagaatt aggtccagca gcagctgatg gcttctctct
1561 gctcatgtct gactgcactg atgtgctgac tcgtgctggc catgccgaag tgcggatcat
1621 gttccgccag cggttcttca cagataatgt gcctgctttg gtccagggct tccatgctgc
1681 tccccaagat gtgaagccaa actacttgaa gggtctttct catgtactta acaggctgcc
1741 caagcctgta ctcttgccag agctgcccac gcttctttcc ttgctgctgg aggccctgtc
1801 ctgccctgac tgtgtggtgc agctctccac cctcagctgc cttcagcctc ttctactgga
1861 agcaccccaa gtcatgagtc ttcacgtgga caccctcgtc accaagtttc tgaacctcag
1921 ctctagccct tccatggctg tccggatcgc cgcactgcag tgcatgcatg ctctcactcg
1981 cctgcccacc cctgtgctgc tgccgtacaa accacaggtg attcgggcct tagccaaacc
2041 cctggatgac aagaagagac tggtgcgcaa ggaagcagtg tcagccagag gggagtggtt
2101 tctgttgggg agccctggca gctgagccct cagtcctggc ctagactgtt ctgacaatct
2161 aacctgggat tactaactgt tgagccatct tccccaaagc agggaaacca ctggtctctg
2221 actgcctttc ccacagacac agcacaaatg ctaggcctct gttgcatggc tgtacaaaga
2281 acataagagt ccatatttct agtggatttg taaaataagt gtgtgtgaga cacttgcgtt
2341 tgaagaaaga tctagggtcc tgggtctctt gcatttatat gtcagaaaag gggcgatatg
2401 ctgctgaggg gtgagtgcat atgagtgtgg ccctgaggac cagggctggc agatgttgtc
2461 tacctgctga agaataaaga tttcttttgg t
//