LOCUS AK056233 2351 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31671 fis, clone NT2RI2004985, highly similar
to HEAT repeat-containing protein 2.
ACCESSION AK056233
VERSION AK056233.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2351)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2351
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2004985"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012847"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 783..1973
/codon_start=1
/note="highly similar to HEAT repeat-containing protein 2"
/protein_id="BAG51654.1"
/translation="MRGCPREALQPHLAAIATELAQAHICQASENDLYLERLLLCVQA
LVSVCHEDCGVASLQLLDVLLTIVALAGATGLRDRAQETMDSLAMVEGVSSCQDLYRK
HIGPLLERVTASHLDWTAHSPELLQFSVIVAQSGPALGEALPHVVPTLRACLQPSQDP
QMRLKLFSILSTVLLRATDTINSQGQFPSYLETVTKDILAPNLQWHAGRTAAAIRTAA
VSCLWALTSSEVLSAEQIRDVQETLMPQVLTTLEEDSKMTRLISCRIINTFLKTSGGM
TDPEKLIRIYPELLKRLDDVSNDVRMAAASTLVTWLQCVKGANAKSYYQSSVQYLYRE
LLVHLDDPERAIQDAILEVLKEGSGLFPDLLVRETEAVIHKHRSATYCEQLLQHVQAV
PATQ"
BASE COUNT 458 a 751 c 672 g 470 t
ORIGIN
1 tttcgccgcc gtgcgccgcg agagctgcag ctgcgccgcc gccctggcgc aggccacgcc
61 cgcactggaa ggtccgtgtg gccgccattg aagccacagg cgcagtgatc cattttggca
121 acgggaagtc cgtggacgac gtgctttccc attttgctca gcgactgttt gatgacgtcc
181 cgcaggtccg gcgggcggtg gcctccgtgg tgggcggctg gctgctgtgt ctgcgtgacc
241 gttactcctt cttccacaag ctcatccctc tgctgctcag tagcctcaac gacgaggtgc
301 ctgaggtcag gcagctggct gccagcctct gggaggacgt tggcctgcag tggcagaagg
361 agaatgagga ggacctgaag gacaagctgg actttgcccc tcccacccca ccccattacc
421 ctccacatga gcgccgccct gtgctgggct gccgggagct cgtcttcagg aacctctcca
481 agatcctccc tgccctgtgc cacgacatca ccgactgggt ggtggggacc cgagtgaagt
541 cggcacagct gctcccagtg ctgctgctgc atgccgagga ccacgccacg cagcacctgg
601 aggtcgtcct ccggaccctg ttccaggcct gcaccgacga ggaggcagcc gtggtccaaa
661 gttgtaccag atccgcagag ctcgtcggga cgtttgtcag ccctgaggtg tttctgaagc
721 tgatcttatc gacgctgaag aagacgccct ctgcctccgg cctcctggtg ctggcctccg
781 ccatgcgggg ttgcccccga gaagccctcc agccgcacct ggcagccatc gccacagagc
841 tggcacaggc ccacatctgc caggcatctg aaaacgacct ctacctggag cgcctgctgc
901 tgtgtgtgca ggctctggtg tctgtgtgtc atgaggactg tggcgtggcc agcctgcagc
961 tcttggacgt gctgctgaca atagtggccc tcgcaggtgc taccggcctg agggacaggg
1021 cacaggagac gatggactca ctggccatgg tggagggtgt cagcagctgc caggacctct
1081 accgcaagca cattggtccc ctcctggagc gggtgaccgc gtcgcacctt gactggaccg
1141 cacactcgcc ggagctcctg cagttcagtg tcatcgtcgc acagtcaggc cctgccctgg
1201 gagaagccct gccacacgtc gtgcccacgc tgagggcctg tctgcagccc tcccaagacc
1261 cgcagatgcg cctgaagctg ttctccatcc tgtccaccgt gctgctcaga gccacggaca
1321 ccatcaactc ccaggggcag tttcccagct acctcgagac ggtgacaaag gacatcctgg
1381 cccccaatct gcagtggcat gcggggagga cagccgcggc catccgcacg gctgccgtgt
1441 cctgcctctg ggcgctcacc agcagcgagg tcctgtcggc agagcagata cgggacgtgc
1501 aggaaacact gatgccccag gtcctgacca ccctggagga ggattcgaag atgacgcgac
1561 tgatctcatg ccgtattatc aacacgttct taaaaacctc gggcggcatg acggatccag
1621 agaagctcat caggatttat cctgaactct taaaacgcct agatgacgtg tccaacgatg
1681 tgaggatggc agccgcctcc accttggtca cctggctgca gtgtgtcaag ggtgccaacg
1741 caaaatccta ctatcagagc agtgtccagt acctgtaccg agagttgctg gttcaccttg
1801 acgatccaga gagggccatc caggatgcaa ttttagaggt cctcaaagag ggcagcgggc
1861 tgttcccaga tctcctggtg agggagacgg aggccgtcat ccacaagcac cgctcggcca
1921 cctactgcga gcagctcctg cagcatgtgc aggccgtgcc agccacacag tgaccacgct
1981 ggtttcagcc acggcacacc cttgtcccca cctgagccag agtttgtggc ctttaaatct
2041 cataaacaag gcacctctgt gccagcagtg agactgtgac agcaagaatg tactcctcag
2101 gacacctgcc cactctttcc ctggaataac agcctctgag tggattctgc atgttatgtg
2161 atttgttctg ttcatcgaga gggctcccaa acatctgcag ctgatttgaa attaaaagta
2221 agtcgcagcc gctcctcccg cagccacttc agcagcatct tagattttaa gcctcacgtg
2281 cgcagctggt tcatgaacta ttggctgcat cctgcttagg tgcccaccaa gaaggttttt
2341 acctacttaa c
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