LOCUS AK056204 2775 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31642 fis, clone NT2RI2003738, highly similar
to Kelch-like ECH-associated protein 1.
ACCESSION AK056204
VERSION AK056204.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2775)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2775
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2003738"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012818"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 375..2249
/codon_start=1
/note="highly similar to Kelch-like ECH-associated
protein 1"
/protein_id="BAG51647.1"
/translation="MQPDPRPSGAGACCRFLPLQSQCPEGAGDAVMYASTECKAEVTP
SQHGNRTFSYTLEDHTKQAFGIMNELRLSQQLCDVTLQVKYQDAPAAQFMAHKVVLAS
SSPVFKAMFTNGLREQGMEVVSIEGIHPKVMERLIEFAYTASISMGEKCVLHVMNGAV
MYQIDSVVRACSDFLVQQLDPSNAIGIANFAEQIGCVELHQRAREYIYMHFGEVAKQE
EFFNLSHCQLVTLISRDDLNVRCESEVFHACINWVKYDCEQRRFYVQALLRAVRCHSL
TPNFLQMQLQKCEILQSDSRCKDYLVKIFEELTLHKPTQVMPCRAPKVGRLIYTAGGY
FRQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSA
LDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW
HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMSTIRS
GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRI
YVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVTMEPCRKQIDQQNCTC
"
BASE COUNT 577 a 831 c 864 g 503 t
ORIGIN
1 aaaaggagaa tagcagatgg tggcgcgcag ccccgcgagg agacatccag caacgaaatc
61 gggagatgga agggacagtg agaagggggg cctggctgtg cgcccccgcc cgatgcccca
121 ctcctcgccg acgggcgccg ggcacctgcg ggaagggcgg gagaatcgcc gctcctttcc
181 cgccgcgccc tttccgccct ctccccgcct ccttttcggg cgtcccgagg ccgctcccca
241 accgacaacc aagaccccgc aggccacgca gccctggagc cgaggccccc cgacggcgga
301 ggcgcccgcg ggtcccctac agccaaggtc cctgagtgcc agaggtggtg gtgttgctta
361 tcttctggaa ccccatgcag ccagatccca ggcctagcgg ggctggggcc tgctgccgat
421 tcctgcccct gcagtcacag tgccctgagg gggcagggga cgcggtgatg tacgcctcca
481 ctgagtgcaa ggcggaggtg acgccctccc agcatggcaa ccgcaccttc agctacaccc
541 tggaggatca taccaagcag gcctttggca tcatgaacga gctgcggctc agccagcagc
601 tgtgtgacgt cacactgcag gtcaagtacc aggatgcacc ggccgcccag ttcatggccc
661 acaaggtggt gctggcctca tccagccctg tcttcaaggc catgttcacc aacgggctgc
721 gggagcaggg catggaggtg gtgtccattg agggtatcca ccccaaggtc atggagcgcc
781 tcattgaatt cgcctacacg gcctccatct ccatgggcga gaagtgtgtc ctccacgtca
841 tgaacggtgc tgtcatgtac cagatcgaca gcgttgtccg tgcctgcagt gacttcctgg
901 tgcagcagct ggaccccagc aatgccatcg gcatcgccaa cttcgctgag cagattggct
961 gtgtggagtt gcaccagcgt gcccgggagt acatctacat gcattttggg gaggtggcca
1021 agcaagagga gttcttcaac ctgtcccact gccaactggt gaccctcatc agccgggacg
1081 acctgaacgt gcgctgcgag tccgaggtct tccacgcctg catcaactgg gtcaagtacg
1141 actgcgaaca gcgacggttc tacgtccagg cgctgctgcg ggccgtgcgc tgccactcgt
1201 tgacgccgaa cttcctgcag atgcagctgc agaagtgcga gatcctgcag tccgactccc
1261 gctgcaagga ctacctggtc aagatcttcg aggagctcac cctgcacaag cccacgcagg
1321 tgatgccctg ccgggcgccc aaggtgggcc gcctgatcta caccgcgggc ggctacttcc
1381 gacagtcgct cagctacctg gaggcttaca accccagtga cggcacctgg ctccggttgg
1441 cggacctgca ggtgccgcgg agcggcctgg ccggctgcgt ggtgggcggg ctgttgtacg
1501 ccgtgggcgg caggaacaac tcgcccgacg gcaacaccga ctccagcgcc ctggactgtt
1561 acaaccccat gaccaatcag tggtcgccct gcgcccccat gagcgtgccc cgtaaccgca
1621 tcggggtggg ggtcatcgat ggccacatct atgccgtcgg cggctcccac ggctgcatcc
1681 accacaacag tgtggagagg tatgagccag agcgggatga gtggcacttg gtggccccaa
1741 tgctgacacg aaggatcggg gtgggcgtgg ctgtcctcaa tcgtctgctt tatgccgtgg
1801 ggggctttga cgggacaaac cgccttaatt cagctgagtg ttactaccca gagaggaacg
1861 agtggcgaat gatcacagca atgagcacca tccgaagcgg ggcaggcgtc tgcgtcctgc
1921 acaactgtat ctatgctgct gggggctatg atggtcagga ccagctgaac agcgtggagc
1981 gctacgatgt ggaaacagag acgtggactt tcgtagcccc catgaagcac cggcgaagtg
2041 ccctggggat cactgtccac caggggagaa tctacgtcct tggaggctat gatggtcaca
2101 cgttcctgga cagtgtggag tgttacgacc cagatacaga cacctggagc gaggtgaccc
2161 gaatgacatc gggccggagt ggggtgggcg tggctgtcac catggagccc tgccggaagc
2221 agattgacca gcagaactgt acctgttgag gcactcttgt ttcttgggca aaaatacagt
2281 ccaatgggga gtatcattgt ttttgtacaa aaaccgggac taaaagaaaa gacagcactg
2341 caaataaccc atcttccggg aagggaggcc aggatgcctc agtgttaaaa tgacatctca
2401 aaagaagtcc aaagcgggaa tcatgtgccc ctcagcggag ccccgggagt gtccaagaca
2461 gcctggctgg gaaagggggt gtggaaagag caggcttcca ggagagaggc ccccaaaccc
2521 tctggccggg taataggcct gggtcccact cacccatgcc ggcagctgtc accatgtgat
2581 ttattcttgg atacctggga gggggccaat gggggcctca gggggaggcc ccctctggaa
2641 atgtggttcc cagggatggg cctgtacata gaagccaccg gatggcactt ccccaccgga
2701 tggacagtta ttttgttgat aagtaaccct gtaattttcc aaggaaaata aagaacagac
2761 taactggtgt ctttc
//