LOCUS AK056103 2129 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31541 fis, clone NT2RI2000822, highly similar
to Claudin-15.
ACCESSION AK056103
VERSION AK056103.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2129)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2129
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2000822"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012717"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 1127..1813
/codon_start=1
/note="highly similar to Claudin-15"
/protein_id="BAG51627.1"
/translation="MSMAVETFGFFMATVGLLMLGVTLPNSYWRVSTVHGNVITTNTI
FENLWFSCATDSLGVYNCWEFPSMLALSGYIQACRALMITAILLGFLGLLLGIAGLRC
TNIGGLELSRKAKLAATAGALHILAGICGMVAISWYAFNITRDFFDPLYPGTKYELGP
ALYLGWSASLISILGGLCLCSACCCGSDEDPAASARRPYQAPVSVMPVATSDQEGDSS
FGKYGRNAYV"
BASE COUNT 378 a 706 c 575 g 470 t
ORIGIN
1 ctgcactggc tcgggatggg gaccagaggc tgctaatcca tcatcattaa cgaatagagt
61 gggtgacagt ccctgataac tgggaacagg ttgcagagct tagccacagg atcacgctcc
121 aggctgttgg ccagcaggac caggctcgat gctgagtcaa agatcaactt aggaggaaat
181 ttgagttttg ggtgagagcg actccctggt ggcctcagcc ctgtgacact cacatccagg
241 acagttcccg gtgccaagcg ctggttatgt gtggggggct tgactccctg gtcccaacga
301 ggtctcagtg tgttgcccag gctggtcttg aactcctgag ttcaagcaat cgtctcagcc
361 cagcctccca aagtggtagg attacaggcg agagccactg cgcccggccc ctggtcccag
421 ttctcaccac agcccctgca gtaatcagtc gggtatgtca ctgacagagc agaagctcag
481 gggactaaaa ctccccgcct gagttccctg gtgaatggat ggtggggccg agttccattc
541 caggctggat ggagcccaga gctgtgggtc tcctaccctc ccatcccctc attccagctt
601 gatcttcctt aagagactca tacgccccaa ccccttggtc tgagtatctt agattgttct
661 cgtggttcct ccgtccttca ccactgaagg ctgctgttca ttctctctcc gtctctgtcc
721 cttattgctc tcacgtctgt ctctgtcatc ttttcactcc ttgtccctct tactccgttc
781 tttggccccc aatgaaagct gagtcagaga cagacgcttc ccctcagttc ccagtgcctc
841 ccttgggggc ccctccttgg ctgtatccgt cagtggctcc aggctgccgc gcgcaggctt
901 agctcattcc tctgacctgc caggaagcag agagacccac agagcaggag ggaggcagaa
961 agtggagacg gacctgagcc cgaggaagag gcaggcagag gctgaggctg attccacccc
1021 agcctgcctg gacaaccctc cttagccgca gccccttcca gttccctagg ggttctgccc
1081 ctccccctct ctggggcacc agccccccag ggtcctgcat cccaccatgt cgatggctgt
1141 ggaaaccttt ggcttcttca tggcaactgt ggggctgctg atgctggggg tgactctgcc
1201 aaacagctac tggcgagtgt ccactgtgca cgggaacgtc atcaccacca acaccatctt
1261 cgagaacctc tggtttagct gtgccaccga ctccctgggc gtctacaact gctgggagtt
1321 cccgtccatg ctggccctct ctgggtatat tcaggcctgc cgggcactca tgatcaccgc
1381 catcctcctg ggcttcctcg gcctcttgct aggcatagcg ggcctgcgct gcaccaacat
1441 tgggggcctg gagctctcca ggaaagccaa gctggcggcc accgcagggg ccctccacat
1501 tctggccggt atctgcggga tggtggccat ctcctggtac gccttcaaca tcacccggga
1561 cttcttcgac cccttgtacc ccggaaccaa gtacgagctg ggccccgccc tctacctggg
1621 gtggagcgcc tcactgatct ccatcctggg tggcctctgc ctctgctccg cctgctgctg
1681 cggctctgac gaggacccag ccgccagcgc ccggcggccc taccaggctc cagtgtccgt
1741 gatgcccgtc gccacctcgg accaagaagg cgacagcagc tttggcaaat acggcagaaa
1801 cgcctacgtg tagcagctct ggcccgtggg ccccgctgtc ttcccactgc cccaaggaga
1861 ggggacctgg ccggggccca ttcccctata gtaacctcag gggccggcca cgccccgctc
1921 ccgtagcccc gccccggcca cggccccgtg tcttgcactc tcatggcccc tccaggccaa
1981 gaactgctct tgggaagtcg catatctccc ctctgaggct ggatccctca tcttctgacc
2041 ctgggttctg ggctgtgaag gggacggtgt ccccgcacgt ttgtattgtg tataaataca
2101 ttcattaata aatgcatatt gtgaccgtt
//