LOCUS AK056088 2132 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31526 fis, clone NT2RI2000341, moderately
similar to ZINC FINGER PROTEIN 43.
ACCESSION AK056088
VERSION AK056088.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2132)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2132
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2000341"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000012702"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 148..1878
/codon_start=1
/protein_id="BAB71090.1"
/translation="MVAEPPVICSHFAQHFSPEQNIKDSFQKVTPRRYGKCEHENLQL
SKSVDECKVQKGGYNGLNQCLPTTQSKIFQCDKYMKIFHKFSNLNGHKVRHTRKKPFK
YKEFGKSFCIFSNLTQHKIICTRVNFYKCEDCGKAFNGSSIFTKHKRIHIGEKSYICE
ECGKACNQFTNLTTHKIIYTRDKLYKREECSKAFNLSSHITTHTIIHTGENPYKREEC
DKAFNQSSTLTTHKIIHTREKLNEYKECGKAFNQSSHLTRHKIIHTGEKPYKCEECGK
AFNQSSHLTRHKIIHTGEKPYKCEECGKAFRQSSHLTTHKIIHTGEKPYKCEECGKAF
NKSSHLTRHKSIHTGEKPYQCEKCGKASNQSSNLTEHKNIHTEEKPYKCEECGKAFNQ
FSNLTTHKRIHTGEKPYKCEECGKAFNQSSILTTHKRIHTGEKSYKCEECGKAFYRSS
KLTEHKKIHTGEKPYTCEECGKAFNHSSHLATHKVIHTGEKPYQCEECGKAFNQSSHL
TRHKRIHTGEKPYQCEKCGKAFNQSSNLTGHKKIHTGEKLYKPKRCNSDFENTSKFSK
HKRNYAGEKS"
BASE COUNT 833 a 423 c 347 g 529 t
ORIGIN
1 tcttctagag gcccagcctc tatggccctc tgacctgcag gtattggcga tccatagcta
61 agacgccagg tcccccggaa acctagaaat gacctgatca cctgtctgga acaagaaaaa
121 gagccttgga ttagaaagag acataggatg gtggccgaac ccccagttat ttgttctcat
181 tttgcccaac acttttcacc agagcagaac ataaaagatt ctttccaaaa agtgacacca
241 agaagatatg gaaaatgtga acatgagaat ttacagttaa gtaaaagtgt ggatgagtgc
301 aaagtgcaaa aaggaggtta taatggactt aaccaatgtt tgccaactac ccagagcaaa
361 atatttcaat gtgataaata tatgaaaatc tttcataaat tttcaaattt aaatggacat
421 aaggtaagac acaccagaaa aaaacctttt aaatataaag aatttggcaa atcattttgc
481 atattttcaa acctaactca acataaaata atttgtacta gagtaaattt ctacaaatgt
541 gaagactgtg gaaaagcctt taatggatcc tcaatcttta ctaaacataa aagaattcat
601 attggggaga aatcgtacat atgtgaagaa tgtggcaaag cctgtaacca gttcacaaac
661 cttactacac ataagataat ttatactaga gacaaactct acaaacgtga agaatgtagc
721 aaagccttta acctgtcgtc acacattaca acacatacaa taattcatac tggagagaat
781 ccctacaaac gtgaagaatg tgacaaagcc tttaatcagt cctcaaccct tactacacat
841 aagataattc ataccagaga gaaactcaat gaatataagg aatgtggcaa agctttcaac
901 cagtcctcac accttaccag acataagata attcatactg gagagaaacc ctacaaatgt
961 gaagaatgtg gcaaagcctt taaccagtcc tcacacctta ccagacataa gataattcat
1021 actggagaga agccctacaa atgtgaagaa tgtggcaaag cctttaggca gtcctcacac
1081 cttactacac ataagataat tcatactgga gagaaaccct acaaatgtga agaatgtggc
1141 aaagctttta acaagtcctc acaccttact agacataaga gcattcatac tggagaaaaa
1201 ccctaccagt gtgaaaaatg tggcaaagct tctaaccaat cctcaaacct tactgaacat
1261 aagaatattc atactgaaga gaaaccatac aaatgtgaag aatgtgggaa agcctttaac
1321 cagttctcaa accttactac acataaaaga attcatactg gagagaaacc ctacaaatgt
1381 gaagaatgtg gcaaagcttt taaccagtcc tcaatcctta ctacacataa gagaattcat
1441 actggagaga aatcctacaa atgtgaagaa tgtggcaaag ctttctatcg atcctcaaaa
1501 cttactgaac ataagaaaat tcatactgga gagaaaccct acacatgtga agaatgtggc
1561 aaagccttta accactcctc acaccttgct acacataagg taattcatac tggagagaaa
1621 ccctaccaat gtgaagaatg tggtaaagcc tttaaccagt cctcacacct tactagacat
1681 aagagaattc atactggaga gaaaccctac caatgtgaaa aatgtggcaa agcttttaac
1741 cagtcctcaa accttactgg acataagaaa attcatactg gtgagaaact ctacaaacct
1801 aaaagatgta acagtgattt tgaaaacact tcaaagtttt ctaaacataa aagaaattat
1861 gctggtgaga aatcttagaa atgtgaagaa tgtaacaaaa cctttaaaag ttgtcacact
1921 tgattgtgca taagataatt catactaaaa aaaaacctat aagtgtgaag aatgtggcaa
1981 aacttttaac caatgctcac accttattgc acaggaaagc atttgtacta gaaaaaaatt
2041 tcaaatatac agaatgtgaa aaagccatta atatctgttc acatcttact caacatcaga
2101 gatttcatac ttaataaaag cattatacat gc
//