LOCUS AK056068 2682 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31506 fis, clone NT2NE2005876, highly similar
to SH2 domain-containing protein 3C.
ACCESSION AK056068
VERSION AK056068.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2682
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2005876"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000012682"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 146..2254
/codon_start=1
/note="highly similar to SH2 domain-containing protein 3C"
/protein_id="BAG51614.1"
/translation="MTERCSLWSALSAAACCFYRGSFVQVQFSKEKYILDSSPEKLHK
ELEEELKLSSTDLRSHAWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRN
QALHFKINKVVVKAGESYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYCP
VNRTFPLRYLEASYGLGQGSSKPASPVSPSGPKGSHMKRRSVTMTDGLTADKVTRSDG
CPTSTSLPRPRDSIRSCALSMDQIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPSA
TALPASPVARRSSEPQLCPGSAPKTHGESDKGPHTSPSHTLGKASPSPSLSSYSDPDS
GHYCQLQPPVRGSREWAATETSSQQARSYGERLKELSENGAPEGDWGKTFTVPIVEVT
SSFNPATFQSLLIPRDNRPLEVGLLRKVKELLAEVDARTLARHVTKVDCLVARILGVT
KEMQTLMGVRWGMELLTLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLH
KTIQLAAELRGTMGNMFSFAAVMGALDMAQISRLEQTWVTLRQRHTEGAILYEKKLKP
FLKSLNEGKEGPPLSNTTFPHVLPLITLLECDSAPPEGPEPWGSTEHGVEVVLAHLEA
ARTVAHHGGLYHTNAEVKLQGFQARPELLEVFSTEFQMRLLWGSQGASSSQARRYEKF
DKVLTALSHKLEPAVRSSEL"
BASE COUNT 526 a 927 c 750 g 479 t
ORIGIN
1 cccgctcctc ccccgacaag gcgatgaggt aatcgcgccg ctgagaggca cgcgcagccg
61 gtgcctagcc ggttggtccc tgcgcccctg ccccgccggc caccgccccc ccacaccgtc
121 ccggccccgg cagcctggcc ccaccatgac cgagcggtgc agcctgtgga gtgccctgtc
181 ggccgccgcc tgctgcttct accgcggctc cttcgtgcag gtgcagttct ccaaggagaa
241 gtacatcctg gactcatcgc cagagaaact ccacaaggaa ttggaggagg agctcaaact
301 cagcagcacg gatctccgca gccatgcctg gtaccatggc cgcatccccc gagaggtctc
361 ggagaccttg gtacaacgca acggcgactt cctcatccgg gactcactca ccagcctggg
421 cgactatgtg ctcacgtgcc gctggcgcaa ccaggccttg cacttcaaga tcaacaaggt
481 ggtggtgaag gcaggcgaga gctacacaca catccagtac ctgtttgagc aggagagctt
541 tgaccacgtg cccgccctcg tgcgctatca tgtgggcagc cgcaaggctg tgtcagagca
601 gagtggtgcc atcatctact gcccggtgaa ccgcaccttc ccactgcgct acctcgaggc
661 cagctatggc ctgggacagg ggagtagcaa gcctgctagc cccgtcagcc cctcaggccc
721 caagggcagc cacatgaagc ggcgcagcgt caccatgacc gatgggctca ctgctgacaa
781 ggtcacccgc agcgatggct gccccaccag tacgtcgctg ccccgccctc gggactccat
841 ccgcagctgt gccctcagca tggaccagat cccagacctg cactcaccca tgtcgcccat
901 ctccgagagc cctagctccc ctgcctacag cactgtaacc cgtgtccatg ccgcccctgc
961 agccccttct gccacagcat tgcctgcctc ccctgtcgcc cgccgttcca gtgagcccca
1021 gctgtgtccc ggaagtgccc caaagaccca tggggagtca gacaagggcc cccacaccag
1081 cccctcccac acccttggca aggcctcccc gtcaccatca ctcagcagct acagtgaccc
1141 ggactctggc cactactgcc agctccagcc tcccgtgcgt ggcagccgag agtgggcagc
1201 gactgagacc tccagccagc aggccaggag ctatggggag aggctaaagg aactgtcaga
1261 aaatggggcc cctgaagggg actggggcaa gaccttcaca gtccccatcg tggaagtcac
1321 ttcttccttc aacccggcca ccttccagtc actactgatc cccagggata accggccact
1381 ggaggtgggc cttctgcgca aggtcaagga gctgctggca gaagtggatg cccggacgct
1441 ggcccggcat gtcaccaagg tggactgcct ggttgctagg atactgggcg ttaccaagga
1501 gatgcagacc ctaatgggag tccgctgggg catggaactg ctcaccctcc cccatggccg
1561 gcagctacgc ctagacctgc tggaaaggtt ccacaccatg tccatcatgc tggccgtgga
1621 catcctgggc tgcaccggct ctgcggagga gcgggcagcg ctgctgcaca agaccattca
1681 gctggcggcc gagctgcggg ggactatggg caacatgttc agcttcgcgg cggtcatggg
1741 tgccctggac atggctcaga tttctcggct ggagcagaca tgggtgaccc tgcggcagcg
1801 acacacagag ggtgccatcc tgtacgagaa gaagctcaag ccttttctca agagcctcaa
1861 cgagggcaaa gaaggcccgc cgctgagcaa caccacgttt cctcatgtgc tgcccctcat
1921 caccctgctg gagtgtgact cggccccacc agagggccct gagccctggg gcagcacgga
1981 gcacggcgtg gaggtggtgc tggctcacct ggaggccgcc cgcacagtgg cacaccacgg
2041 aggcctgtac cacaccaatg ctgaagtcaa gctgcagggg ttccaggccc ggccggagct
2101 cctggaggtg ttcagcacgg agttccagat gcgccttctc tggggcagtc agggtgccag
2161 cagcagccag gcccggcgct atgagaagtt cgacaaggtc ctcactgccc tgtcccacaa
2221 gctggaacct gctgtccgct ccagcgagct gtgaccccag ggacatttcc cctctgcagc
2281 tgcggacagc gtcaggggca gaggggcaca caactttccc cagagcaccc caaggacact
2341 gtgatcaacc cgagaatgtt ctgggttcaa ctcaagcatc tcccttgcac ctccagggtc
2401 ctgcgtggac tctgggttcc atcccacctg ctacatgctc accaggtctc cattgaggaa
2461 gaacaggaac gccggttccc ccaccagctt ttgctgctcc ccttcctgct ggggttccct
2521 gttttcgagc catgggaggc aggctgctca cgcctcctca ctctctgtct gtccctcacc
2581 aacaccaagg cctccatctc actgtaaata agtctctgtt ctgtaaatag atgtacagaa
2641 gccatgttat ttctttcata taataaactt ttatgactct tt
//