LOCUS AK055975 2693 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31413 fis, clone NT2NE2000259, moderately
similar to OOCYTE ZINC FINGER PROTEIN XLCOF6.1.
ACCESSION AK055975
VERSION AK055975.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2693)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2693
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2000259"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000012589"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 233..961
/codon_start=1
/protein_id="BAB71061.1"
/translation="MGELSPAVAQEETPPGDWLFGGVRWGWNFRCKPPVGLNPRTGPE
GLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKGFGHKPGLKKHPAAPPGGRPFTCA
TCGKSFQLQVSLSAHQRSCGAPDGSGPGTGGGGSGSGGGGGGSGGGSARDGSALRCGE
CGRCFTRPAHLIRHRMLHTGERPFPCTECEKRFTERSKLIDHYRTHTGVRPFTCTVCG
KSFIRKDHLRKHQRNHAAGAKTPA"
BASE COUNT 577 a 788 c 751 g 577 t
ORIGIN
1 cacggaagat gtaaaaattg taataaaaac agaagtccag gaagagtagg tggtggccac
61 acccgtacat cctactgacc tagaggctca cgggaccctg tttggaccag gccaagccac
121 acggttcttc cctagtcctg cccaggaagg agcctgggaa agccagggca gctccttccc
181 cagccaggac cctgtgctgg ggctgcgaga gcccgcccgg cctgagaggg acatgggtga
241 gctcagtcct gctgtggccc aggaggagac ccctcctggg gactggctct tcggaggggt
301 ccggtggggc tggaatttcc ggtgtaaacc gccagtgggc ctgaacccga ggacggggcc
361 cgaggggctt ccttactcct ccccggacaa cggagaggcc atcttggacc ccagccaggc
421 cccaaggcca ttcaacgaac cctgtaaata ccctggccgg accaaaggct ttggccacaa
481 gccagggctg aagaagcacc ccgcggcgcc ccccgggggc cggcccttca cctgcgccac
541 gtgtgggaag agcttccagc tgcaagtcag cctgagcgcg caccagcgca gctgtggggc
601 gcccgacggg tcgggcccgg gcacaggcgg tggcggcagc ggcagtggcg gcggcggtgg
661 cggcagcggt gggggcagcg cacgggatgg cagcgccctt cggtgtgggg agtgcggccg
721 ttgcttcacg cgccccgcgc acctcatccg ccatcgcatg ctgcacaccg gcgagcggcc
781 cttcccctgc accgagtgtg agaagcgctt caccgaacgc tccaagctca tcgaccacta
841 ccgaacgcac acgggcgtgc ggcccttcac ctgcaccgtc tgcggcaaaa gcttcatccg
901 caaggaccac ctccgcaagc accagcgcaa ccatgcagcg ggcgccaaga ccccggcctg
961 aggccagcca ctcccgacgc cgcccgcacc tcctgatccc ttcaagagcc ccgcctccaa
1021 aggacctttg gcctccacag accttgtgac cgactggact tgtggcctca gcgtcctggg
1081 acccaccgat ggcggggaca tgtgagcgcc tccagcccca tagcccctgc cggccgcacg
1141 tgtaaaaagc cccgtgtgca ggcagcaggg cggcgtggaa gcttcaggca gacgcgggac
1201 ggggagaacc aaatgtccaa gttgctgaac tgatgatcac tggagaaaga gaaactatcc
1261 accaggacag ctgccacctc taaaccaagt agaattctct gtgaaatggg agcgccgtag
1321 aattttaagt aatttaattg caaacctgtt ttgttttttg ttttttgttt ttttttaatt
1381 cttgaggaaa aagctggaaa atagtaatag ggctatttaa attttgtagg tacttttggt
1441 tttcagggcg tgcatttctg tcactatctc actgagtctg atagtgtgtt ggaaggttgg
1501 ccagttgggg acccctggcc cactgactcc tggggatggg gtcctgtgtg tgcccctgct
1561 ctgcccagtt gggctgagtg ggcctagcgc accaagcccc tgggcagtga gggccattgg
1621 gtcccttgga gcacacctca gtgcagcagg aaggacccct ccgggagtag cggttgcatt
1681 tcccagcttg cctctcctga aaaggccccc caaaagtgct ggccccaact tttctctatt
1741 ttgggccatc tgtggtaccc gtcccaaggg cacttggtgg tgtcccctag tgtgtgactc
1801 cctggcctca taaggacgag ttgtctgaaa tcccagcgtt aggtctgggg agatggagaa
1861 gctgaaactg gggagctgca ccacaaacgt ctagctctca gcagagctgg gagcaaagcc
1921 tggccgccca ccccaacctg gggctgcctc ccactccgtg agatgcttct gtctcctgtt
1981 cactttgtgt ggtagtttct tattttcaaa atgcatctca tttgatcatt actgtgacct
2041 tgggaagcag caggacaggg atttcttttt agaggtgcaa actgctcaga ggggacacac
2101 ctcagcctct cactgtgggt acacgtggcg tgccatgagt ggggaagagc aacaggcgag
2161 atgcctcatt ctactggaac atcactgtgg gtgaacagag atttccaggt tttccctctt
2221 aaaatatttg tcccacaccg acaagagtcc agtcaccagg cctcaaagga acttctgctt
2281 gtagcagccg cctcccctgt gccccagcct ccttaatatg tgcactctca gagggcacag
2341 ctcacgaggc tgggtttggg ggccaagtgg cttgttcatt ccagcatcta acatcataaa
2401 ggtgggccca gatttcttga ttcgaccaca gtgctgttcc taccacacaa atatccattc
2461 ctgttttgtt gaagcagcca ctggtcctct tgtttcccct gcagacggag ggacctgaca
2521 gtgcccattc attcagcccc ctcatgcata cttttattag gcgatagact agttaagaaa
2581 attgtttcta tgtactgtat attttgtacc tgtttacact tctaatattg atataactga
2641 tattttgaaa aataagagaa aacatcctgt taaaataaaa cctaaccagc acc
//