LOCUS AK055921 2608 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31359 fis, clone MESAN2000501, weakly similar
to Homo sapiens DNA cytosine methyltransferase 3 alpha (DNMT3A)
mRNA.
ACCESSION AK055921
VERSION AK055921.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2608)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2608
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2000501"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000012535"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 183..1550
/codon_start=1
/protein_id="BAB71045.1"
/translation="MYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATD
SSKYEDKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVS
AQANTSKAQLSTKKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTR
RYQNPSSGSLPPRVRLKPQRYRNEENDSSLKTGLEKMRSGKMAPKPQSRCTSTRSAGE
APSENQSPSKGPEEASSEVQDTNEVHVPGDQDEPQTLGKKGSKNNISVYMTLNQKKSD
SSSASVCSIDSTDDLKSSNSECSSSESFDFPPGSMHAPSTSSTSSSSKEEKKLSNSLK
MKVFSKNVSKCVTPDGRTICVGDIVWAKIYGFPWWPARILTITVSRKDNGLLVRQEAR
ISWFGSPTTSFLALSQLSPFLENFQSRFNKKRKGLYRKAITEAAKAAKQLTPEVRALL
TQFET"
BASE COUNT 856 a 499 c 532 g 721 t
ORIGIN
1 ccgatgaccc ttctcctgtc ccgcatcccg agctgagctt ggctgaaagc ctgtggactt
61 ccaaaccacc acctctcttc catgaaggag caccttatcc tccccctttg tttatcaggg
121 acacatataa ccaatcaata cctcagccac ctcctcggaa aattaagcga cccaaacgaa
181 aaatgtacag ggaagaaccc acttcaataa tgaatgctat taaactacga cccaggcaag
241 ttctgtgtga taaatgtaaa aacagtgttg ttgctgaaaa aaaggaaatt agaaaaggta
301 gtagtgcaac tgactcttct aaatatgaag ataaaaaacg gagaaatgaa agtgtaacta
361 ctgtgaacaa aaaactgaaa actgaccata aagtggatgg gaaaaaccaa aatgaaagcc
421 agaaaagaaa tgctgtggtt aaggtttcaa atattgctca cagcagaggc agagtagtaa
481 aagtttctgc tcaggcaaat acatcaaaag ctcagttaag tactaaaaaa gttctccaga
541 gtaagaacat ggatcatgcg aaagctcggg aagtgttaaa aattgccaaa gaaaaggcac
601 aaaagaagca aaatgaaacc tctacttcca aaaatgcaca ttcaaaagtc catttcacac
661 gtcgatatca gaatcctagc tcaggttccc ttccaccccg ggttcgttta aaaccacaga
721 ggtacaggaa tgaagaaaat gactcttctc tgaagacagg acttgagaaa atgcggagtg
781 gcaagatggc acccaagccc cagtctcgct gcacctctac ccgctcagca ggtgaggccc
841 cttcagaaaa tcagagtccc tcaaaaggcc ctgaagaggc cagcagtgag gttcaggaca
901 caaatgaagt gcatgtgcct ggtgatcagg atgaaccaca gacattgggc aaaaagggca
961 gcaaaaacaa tatctctgtt tatatgaccc taaatcaaaa gaaatctgac tcttccagtg
1021 cttcagtgtg tagcattgat agcacagatg atttgaaatc ttccaactct gagtgtagtt
1081 cttctgaaag ctttgatttt cctccaggca gtatgcatgc accttccacc tcctccactt
1141 cctcctcttc aaaggaagag aaaaagctca gtaattcctt gaaaatgaaa gtcttttcca
1201 aaaacgtctc taaatgcgtc acaccagatg gcaggaccat atgtgtaggg gacattgttt
1261 gggccaagat atatggcttc ccttggtggc cagcccgtat tcttactata actgtgagcc
1321 ggaaagataa cggcctttta gtccgacagg aggcccgtat ttcatggttt gggtctccaa
1381 caacatcttt ccttgctctt tcacaactct cccccttttt agaaaacttc cagtcacgct
1441 ttaataagaa gagaaagggc ctgtatcgca aggctatcac agaggcagct aaggctgcca
1501 agcagctgac ccccgaagtg cgggctttgt tgacacagtt tgaaacgtga acatgggcag
1561 taaggtaggc aagaccattg gaagtcacca cagattttct agtctagtta ggaataattt
1621 ctacaaaata gcgtggccag attggagaga gaagttgcac tcagttggct ggctttttaa
1681 tacttacctt atagccattt ttagactgag agcttaaact gaacatataa tcaaattttg
1741 tgttaaggaa gtgagatttt agcagtattt ttcagttttg aagttcgaaa ccatcccaag
1801 gcataggagc catagcctca actgaaattg aatttttgta gggactgtta attgccattt
1861 gtacctaata ctgtatatat acatatatat acgtgtgtgt gtatatatat atatatatat
1921 atatatatat atatatccgt gtatgtatat atacacacat atatatgtat atatacacat
1981 atatatatat gaaatacagc ctgtcactgt gtgacacaga ttgcatattt gggattgcaa
2041 taagggcttg gtgagctggg ggaatagtgg atatttaatg actacttgtt ttttaaataa
2101 tgaacactta gcctttctat gcgcataatg gtgtaaaagt tagatggtta ggtgtttgac
2161 aaacagatgg ttgcaattca gttacagact ggggaaatag cccagtgttt gggattaaaa
2221 ctgtcaagac tggataggtg ttagtcatca ctgtctttcg tccagtgggg atttaataaa
2281 tactttcaag cttctggttt gggagtttag ataggtttga ttttggattt gtaaatagtg
2341 attgctaaat ttggtcagat ttctcctgac tggctgttcc taaattctta ggatatgtcc
2401 cagtaaaatt atactttgtg aattaattgt catatgtgta attgttgcat tttggatgta
2461 cctaatttga taattaaaac aaaataattt ccgtttaagg tatctgtttg caggtcagaa
2521 aatgagaaaa tgtaattgtg taatgctctg aaatgtaaaa aaaaaaaaaa aaaccaaaaa
2581 aaagctgtaa ataaaatcaa ctaaatcc
//