LOCUS AK055798 2120 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31236 fis, clone KIDNE2004828, moderately
similar to Mus musculus orphan transporter isoform A12 (Xtrp2)
mRNA.
ACCESSION AK055798
VERSION AK055798.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2120)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2120
/clone="KIDNE2004828"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000012412"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 124..2010
/codon_start=1
/protein_id="BAB71018.1"
/translation="MAHAPEPDPAACDLGDERPKWDNKAQYLLSCIGFAVGLGNIWRF
PYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGVWTAISPYLSGVGL
GCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRTGFVEECQGSSAVSY
FWYRQTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYL
VLTIFLIRGLTLPGATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFA
SYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKATNDYEHCLDRNILSLINDF
DFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTET
DLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCL
VCFLSATCFTLQSGNYWLEIFDNFAASLNLLMLAFLEVVGVVYVYGMKRFCDDIAWMT
GRRPSPYWRLTWRVVSPLLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGW
ARAACVLLSLLPVLWVPVAALAQLLTRRRRTWRDRDARPDTDMRPDTDTRPDTDMRPD
TDMR"
BASE COUNT 370 a 668 c 634 g 448 t
ORIGIN
1 aatacaactg cagtggggct gcttgtggtt tccaaacgtc ggcagaggct ggagacggct
61 ctctagtgct gggtgtggag tgaggcacca cccttgccct gaagcctggg gcactcagtc
121 accatggctc atgccccaga accggacccg gccgcctgcg acctcgggga tgagaggccc
181 aagtgggaca acaaggccca gtacctcctg agctgcattg ggtttgccgt ggggctgggg
241 aacatttggc ggttcccata cctgtgccag acctatggag gaggggcctt cctcatcccc
301 tacgtcatcg cgctggtctt cgaggggatc cccattttcc acgtcgagct cgccatcggc
361 cagcggctgc ggaagggcag cgtcggcgtg tggacggcca tctccccgta cctcagtgga
421 gtagggctgg gctgtgtcac gctgtccttc ctgatcagcc tgtactacaa caccatcgtg
481 gcgtgggtgc tgtggtacct cctcaactcc ttccagcacc cgctgccctg gagctcctgc
541 ccaccggacc tcaacagaac agggtttgtg gaggagtgcc agggcagcag cgccgtgagc
601 tacttctggt accggcagac actgaacatc acagccgaca tcaatgacag tggctccatc
661 cagtggtggc tgctcatctg cttggcagcc tcctgggcag tcgtgtacat gtgtgtcatc
721 aggggcattg agactacagg gaaggtgatt tacttcacag ctttgttccc ttacctggtc
781 ctgaccatct ttctcatcag agggctgacc ctgccagggg caacaaaagg actcatctac
841 ttgttcactc ccaacatgca cattctccag aacccccggg tgtggctgga cgcagccacc
901 cagatattct tctctctgtc cctggccttc ggaggacaca tcgcttttgc aagttacaac
961 tcgcccagga atgactgcca gaaggatgcg gtggtcatcg ccctggtcaa caggatgacc
1021 tccctgtacg cgtccatcgc tgtcttctct gtcctggggt tcaaagcaac taatgactac
1081 gagcactgcc tggacagaaa catcctcagc ctcatcaacg actttgactt cccagagcag
1141 agcatctcca gggacgacta cccagccgtc ctcatgcacc tgaacgccac ctggcccaag
1201 agggtggccc agctccccct gaaggcctgc ctcctggaag actttctgga taagagtgcc
1261 tcgggcccgg gcctggcctt cgtcgtcttc acggagaccg acctccacat gccgggggct
1321 cctgtgtggg ccatgctctt cttcgggatg ctgttcacct tggggctatc gaccatgttc
1381 gggaccgtgg aggcggtcat cacacccctg ctggacgtgg gggtcctgcc tagatgggtc
1441 cccaaggagg ccctgactgg gctggtctgc ctggtctgct tcctctccgc cacctgcttc
1501 acgctgcagt ctgggaacta ctggctggag attttcgaca attttgccgc ttccctgaac
1561 ctgctcatgt tggcctttct cgaggttgtg ggtgtcgttt atgtttatgg aatgaaacgg
1621 ttctgcgatg acattgcgtg gatgaccggg aggcggccca gcccctactg gcggctgacc
1681 tggagggtgg tcagtcccct gctgctgacc atctttgtgg cttacatcat cctcctgttc
1741 tggaagccac tgagatacaa ggcctggaac cccaaatacg agctgttccc ctcgcgtcag
1801 gagaagctct acccgggctg ggcgcgcgcc gcctgtgtgc tgctgtcctt gctgcccgtg
1861 ctgtgggtcc cggtggccgc gcttgctcag ctgctcaccc ggcggaggcg gacgtggagg
1921 gacagggacg cgcgcccaga cacggacatg cgcccggaca cggacacgcg cccagacacg
1981 gacatgcgcc cggacacgga catgcgctga agccggccgg agcggggcct gcatgggcgg
2041 gtctgtgggg gggcttggcc tgatggtggg cggggccccg cccacagggc cgaccccaat
2101 acaccagcga ctcaaccttg
//