LOCUS AK055780 2565 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31218 fis, clone KIDNE2004115, highly similar
to Tetratricopeptide repeat protein 19.
ACCESSION AK055780
VERSION AK055780.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2565)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2565
/clone="KIDNE2004115"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000012394"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 484..1305
/codon_start=1
/note="highly similar to Tetratricopeptide repeat protein
19"
/protein_id="BAG51574.1"
/translation="MKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQ
LENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL
EEKIEREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQIS
EEIQGERHPQTIVLVSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLA
AVLMHRERYTQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNSVKL"
BASE COUNT 684 a 541 c 661 g 679 t
ORIGIN
1 agtgcgcaga ggacgcggcg ggagcatgtt ccggctcctg agctggagcc tgggccgagg
61 cttcctgcgg gccgcggggc ggcggtgccg gggctgctcc gcgcgcctgc tcccggggct
121 ggcaggaggt ccggggcccg aggtgcaggt gccgccatcc cgagtcgcgc cgcacggccg
181 gggcccaggc ctgctgccgc tgctggcagc gctcgcctgg ttctcgaggc ccgctgcggc
241 agaggaggag gagcagcagg gagccgacgg ggccgctgcc gaggacgggg cggacgaggc
301 cgaggcagag atcatccagc tgctgaagcg agccaaggtg aggcggctcc gggccctgcg
361 cccggccgag cgcggtagcc tttgtgagcg gggtcttggc gttgctgcgc attactctct
421 ccgcctcgcc gaagagtgga tggaggctcc gcgggtaaaa ttgccgagaa tgagttgagc
481 attatgaaag atgagccaga agaggctgag ttaattttgc atgacgctct tcgtctcgcc
541 tatcagactg ataacaagaa ggccatcact tacacttatg atttgatggc caacttagca
601 tttatacggg gtcagcttga aaatgctgaa caacttttta aagcaacaat gagttacctc
661 cttggagggg gcatgaagca ggaggacaat gcaataattg aaatttccct aaagctggcc
721 agtatctatg ctgcgcagaa cagacaggaa tttgctgttg ctggctatga attctgcatt
781 tcaactctag aggaaaaaat tgaaagagaa aaggaattag cagaagacat tatgtcagtg
841 gaagagaaag ccaataccca cctcctcttg ggcatgtgct tagacgcctg tgctcgctac
901 cttctgttct ccaagcagcc gtcacaggca caaaggatgt atgaaaaagc tctgcagatt
961 tctgaagaaa tacaaggaga aagacaccca cagaccattg tgctggtgag tgacctggct
1021 actaccctgg atgcacaggg ccgctttgat gaggcctata tttatatgca aagggcatca
1081 gatctggcaa gacagataaa tcatcctgag ctacacatgg tactcagtaa tctagctgca
1141 gttttgatgc acagagaacg atatacacaa gcaaaagaga tctaccagga agcactgaag
1201 caagcaaagc tgaaaaaaga tgaaatttct gtacaacaca tcagggaaga gttggctgag
1261 ctgtcaaaga aaagtagacc tttgacaaat tctgtcaagc tctaaatcca tttttgtgta
1321 gggagaataa tgtctagtaa tgtggaagaa tagctatcat tcctgtctct gtggcacccg
1381 atcaatggct taaatctgtc gtttttgata ttcaggtttc ctcaatttag ccttagtgaa
1441 ggaggggttg tacacactgc catttttgta ttttaaagga aaaatgactt tcattcccaa
1501 ctgattatga cctttcagga tgtcgtcaag tgatgctttc agttgtaaca cgtgacttgg
1561 tgctgtccct gctggtctaa gtagaactgt agattcatat gggctggtgt tcctgtgcgc
1621 tgtgggtgtg gtgattcagc ctggcatttc taccataagt ttttggtctg ctgatttgct
1681 gccctgtctt ctcttacttt actttatcaa tacctggcaa actgaccaga attaccttcc
1741 tcatggcaaa gggggattat ggtgaattgt tgttcttata gtctgtttca tgaagcacaa
1801 gtggaattta atacataaaa gagaaaaata tcttagtttg ctaccagcat ccagcatgaa
1861 gttgtaaagt ggggattagg cacgtgacag tatagcaccc atttgaattt aaataaaagt
1921 gaaccatatt tatctggtta tataaaacta aaaatggggg tgtttatata aaactaaaaa
1981 ctaagaatga tgtaaccttt tgtctgtgtt atctgaacac tctacttcct ttgcagcctt
2041 agtcacacaa ctgagtcatc tcaagtactc tttaaggaca cacagcccag gctgttctga
2101 gtcagaatag gcccctacag gtatatttta aaactcttcg taattctaat gtgtactgct
2161 ggtatagctg aactactgac ctggatctta gtcctagcct ttttgctttt gcaatttcag
2221 tatcttcatc tctaaactag ggaaacactg ggattctttc ttagctgtgg gggaaggtat
2281 ttggttagat gactttgaat gaatagactg ctgtgctgaa agagctttat cacactgtct
2341 caaagtatgt aaagatacat aggtggatgc tcttactgca gcagtcatga atacattttt
2401 agccatttac ctaaggaaaa agacagtttt tctaggtacc atgaaggaag attgaccctg
2461 ttggtatgcc tgtgggggtg ggatgtgagt gggactgata aactgatact tttggttcgt
2521 atgtacatac tggaagaatc ttcataataa atgagactac acaac
//