LOCUS AK055678 2888 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31116 fis, clone IMR322000604, highly similar
to PHD finger protein 3.
ACCESSION AK055678
VERSION AK055678.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2888)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2888
/cell_line="IMR32"
/cell_type="neuroblastoma"
/clone="IMR322000604"
/clone_lib="IMR322"
/db_xref="H-InvDB:HIT000012292"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 424..>2888
/codon_start=1
/note="highly similar to PHD finger protein 3"
/protein_id="BAG51553.1"
/translation="MLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDE
GVVKESGNDTIDEEELILPNRNLRDKVEENSVRSPRKSPRLMAQEQVRSLRQSTIAKR
SNAAPLSNTKKASGKTVSTAKAGVKQPERSQVKEEVCMSLKPEYHKENRRCSRNSGQI
EVVPEVSVSSSHSSVSSCLEMKDEDGLDSKHKCNNPGEIDVPSHELNCSLLSETCVTI
GEKKNEALMECKAKPVGSPLFKFSDKEEHEQNDSISGKTGETVVEEMIATRKVEQDSK
ETVKLSHEDDHILEDAGSSDISSDAACTNPNKTENSLVGLPSCVDEVTECNLELKDTM
GIADKTENTLERNKIEPLGYCEDAESNRQLESTEFNKSNLEVVDTSTFGPESNILENA
ICDVPDQNSKQLNAIESTKIESHETANLQDDRNSQSSSVSYLESKSVKSKHTKPVIHS
KQNMTTDAPKKIVAAKYEVIHSKTKVNVKSVKRNTDVPESQQNFHRPVKVRKKQIDKE
PKIQSCNSGVKSVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKSHAHPGCLKEPHHP
AQTGHVSHSSQKQCHKPQQQAPAMKTNSHVKEELEHPGVEHFKEEDKLKLKKPEKNLQ
PRQRRSSKSFSLDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQCGFCKKPHGN
RFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEILDPDTLEN
QATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNSSDCRD
NEIKKWQLAPLRKMGQPVLPRRSS"
BASE COUNT 976 a 551 c 672 g 689 t
ORIGIN
1 agtggggtca cgtgacacgg cccctctcca gctcccgcgc cgccgccgca cgccgatggc
61 tgcggggtct cgcgccgtcg caccgtcccc acgcggcaag cgaccttcgg gctcagggcg
121 gcggcggctg caacgaggat taggagggcg gcgcggaagc caagaatagt gtcgtcagca
181 gcagccattt ggtcccagga ggaaaagagg ctgtggcagc gacgccgacg tcctgcgcgt
241 accccctctc cgcggcaccc accgggcccc ctcctcctcc tcttcggcgg cggcagcgtc
301 caccatcttc ctcttgctgc cagtggtagc gctcgtctgg cggagctggg atccaacctg
361 gagaatgaag tctgtgagga ttttagtgca agtcaaaatg tcttagagga ctcgctgaag
421 aacatgctca gcgataagga tcctatgcta ggatctgcaa gtaaccagtt ctgtttgcct
481 gttttggata gcaatgatcc caatttccag atgccttgtt caacagttgt tggtcttgac
541 gatattatgg atgaaggagt tgttaaagaa agtggcaatg ataccattga tgaagaagaa
601 ctgattttac ctaacaggaa cttaagggac aaggtagaag aaaattcagt gagatctcca
661 agaaaatcac ctcgtttaat ggcacaagaa caagtaagaa gtttgcgaca gagcactatt
721 gccaagcgtt caaatgcagc accattaagt aacacaaaaa aagcatctgg gaagactgta
781 tctactgcta aagcaggagt gaaacaacca gaaaggagtc aggttaaaga agaagtatgt
841 atgtcactga aacctgagta ccataaggag aatagaaggt gcagccgaaa tagcggacaa
901 attgaagtgg tacctgaagt atcagtgtct tcaagtcatt cttcagtgtc atcttgtctt
961 gaaatgaagg atgaagatgg attagattct aagcataagt gtaataatcc gggagaaata
1021 gatgtgccat ctcatgaatt aaattgttca cttctttcag agacttgtgt tactattgga
1081 gaaaagaaaa atgaagcttt gatggaatgt aaagccaagc ctgttggtag tccattgttt
1141 aagttttcag ataaagaaga acatgaacaa aatgattcca tttcaggtaa aacgggtgag
1201 actgttgttg aagaaatgat agcaacaaga aaagttgaac aagattcaaa ggagacagta
1261 aaattatccc atgaagatga ccatattctt gaggacgctg gatcttctga tatttctagt
1321 gatgctgctt gtacaaatcc aaataagaca gaaaacagcc ttgtaggttt gcctagttgt
1381 gtagatgaag tgactgaatg taatttggaa ttgaaggata ccatgggtat tgctgataaa
1441 actgagaaca cccttgaaag aaataaaatt gaaccgttgg gttattgtga agatgcggag
1501 tctaataggc agttggagag cactgagttt aataaatcaa acttagaggt ggttgatact
1561 agtacttttg gaccggaaag taatatcttg gaaaatgcta tttgtgatgt gcctgaccaa
1621 aattcaaaac agttgaatgc tatagaaagt actaaaatag agtcccatga aacagcaaac
1681 cttcaagatg acagaaacag ccagtcaagt agcgtttctt acttagagtc aaaaagtgta
1741 aaatccaaac atacaaaacc tgtaattcat tctaagcaaa acatgaccac agatgctccg
1801 aagaaaattg ttgcagcaaa gtatgaagta atacatagca aaactaaagt taatgtcaaa
1861 agtgtgaaac gaaatactga tgtaccagaa tctcagcaaa attttcatag gccagtcaaa
1921 gtcagaaaaa aacaaattga taaggagcca aagattcaga gttgcaattc tggggttaaa
1981 tctgtgaaaa accaagctca ttctgtactg aaaaaaacat tacaggatca aactttagta
2041 caaattttca agcccttaac tcattctttg agtgataagt cacacgctca tcctggttgc
2101 ttgaaagaac ctcatcatcc tgcacaaact ggacatgtat cacattctag ccagaaacag
2161 tgtcataagc ctcagcaaca ggccccagca atgaaaacca atagtcacgt gaaggaagag
2221 cttgaacacc caggcgttga gcattttaag gaagaggata aactgaaact gaaaaaacct
2281 gagaagaacc tacaaccccg ccaaagaaga agcagcaaaa gtttttcttt agatgagcca
2341 ccattgttca ttccagataa catagctacc ataagaagag aaggctctga tcatagctcc
2401 tcatttgaaa gcaaatatat gtggactccc agcaagcagt gtgggttttg caaaaaacca
2461 catggcaaca ggtttatggt tggctgtggg agatgtgatg actggtttca tggtgattgt
2521 gttgggttaa gtctttctca agcacagcag atgggcgagg aagacaaaga atatgtctgt
2581 gtaaaatgtt gtgctgaaga agacaaaaag actgaaatac tagatccaga tactttggaa
2641 aaccaagcta cagttgaatt ccatagtgga gataaaacaa tggagtgtga aaagcttgga
2701 ttatcaaaac acacaacaaa tgatagaacc aaatatatag atgatacggt gaagcacaag
2761 gtcaaaattt taaaacggga gtctggtgaa ggcagaaatt catcagactg tagagataat
2821 gaaattaaaa aatggcagct agctcctctt cgtaagatgg gacaaccagt tttacctcgg
2881 agatcctc
//