LOCUS AK055617 3229 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31055 fis, clone HSYRA2000743, highly similar
to Oxysterol-binding protein-related protein 5.
ACCESSION AK055617
VERSION AK055617.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3229)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3229
/cell_type="synoviocytes from rtheumatioid arthritis
(HS-RA)"
/clone="HSYRA2000743"
/clone_lib="HSYRA2"
/db_xref="H-InvDB:HIT000012231"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, synoviocytes from rtheumatioid
arthritis"
/organism="Homo sapiens"
CDS 603..2132
/codon_start=1
/note="highly similar to Oxysterol-binding
protein-related protein 5"
/protein_id="BAG51544.1"
/translation="MWTLLKQLRPGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLS
RAAVEEDAYSRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDSRTFYI
AEQVSHHPPVSAFHVSNRKDGFCISGSITAKSRFYGNSLSALLDGKATLTFLNRAEDY
TLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQISGK
ITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPSGEVRRQRLRQHTVPLEEQTELE
SERLWQHVTRAISKGDQHRATQEKFALEEAQRQRARERQESLMPWKPQLFHLDPITQE
WHYRYEDHSPWDPLKDIAQFEQDGILRTLQQEAVARQTTFLGSPGPRHERSGPDQRLR
KASDQPSGHSQATESSGSTPESCPELSDEEQDGDFVPGGESPCPRCRKEARRLQALHE
AILSIREAQQELHRHLSAMLSSTARAAQAPTPGLLQSPRSWFLLCVFLARQLFINHIL
K"
BASE COUNT 636 a 1020 c 1012 g 561 t
ORIGIN
1 tgctgcactg ctgcgagctc atcgagcggc cctccaagaa ggacggcttc tgcttcaagc
61 tcttccaccc gctggatcag tccgtctggg ccgtgaaggg ccccaaaggt gagagcgtgg
121 gctccatcac acagcccctg cccagcagct acctgatctt cagggccgcc tccgagtcag
181 atggtcgctg ctggctggac gccctggagc tggccctgcg ctgctctagc ctactgagac
241 tgggcacctg caagccgggc cgagacgggg agccagggac ctcgccagac gcatcaccct
301 catcgctctg tgggctgcca gcctcagcca ctgtccaccc agaccaagac ctgttcccac
361 tgaacgggtc ttccctggag aacgatgcat tctcagacaa gtcggagaga gagaaccctg
421 aggagtcaga taccgagacc caggaccata gccggaagac ggagagtggc agcgaccagt
481 cagagacccc tggggccccg gtgcggagag ggaccaccta tgtggagcag gtccaggagg
541 agctggggga gctgggcgag gcgtcccagg tggagacagt gtcagaggag aacaagagtc
601 tgatgtggac cctgctgaag cagctacggc caggcatgga cctgtcccgc gtggtgctac
661 ccacgttcgt actggagccg cgctccttcc tgaacaagct ctccgactac tactaccacg
721 cagacctgct ctccagggct gcggtggagg aggatgccta cagccgcatg aagctggtgc
781 tgcggtggta cctgtctggc ttctacaaga agcccaaggg aatcaagaag ccgtacaacc
841 ccatcctggg ggagaccttc cgctgctgct ggttccaccc gcagactgac agccgcacat
901 tctacatagc agagcaggtg tcccaccacc cgcccgtgtc tgccttccac gtcagcaacc
961 ggaaggacgg cttctgcatc agtggcagca tcacagccaa gtccaggttt tatgggaact
1021 cgctgtcggc gctgctggac ggcaaagcca cgctcacctt cctgaaccga gccgaggatt
1081 acacccttac catgccctac gcccactgca aaggaatcct gtatggcacg atgaccctgg
1141 agctgggtgg gaaggtcacc atcgagtgtg cgaagaacaa cttccaggcc cagctggaat
1201 tcaaactcaa gcccttcttc gggggtagca ccagcatcaa ccagatctcg ggaaagatca
1261 cgtcgggaga ggaagtcctg gcgagcctca gtggccactg ggacagggac gtgtttatca
1321 aggaggaagg gagcggaagc agtgcgcttt tctggacccc gagcggggag gtccgcagac
1381 agaggctgag gcagcacacg gtgccgctgg aggagcagac ggagctggag tccgagaggc
1441 tctggcagca cgtcaccagg gccatcagca agggcgacca gcacagggcc acacaggaga
1501 agtttgcact ggaggaggca cagcggcagc gggcccgtga gcggcaggag agcctcatgc
1561 cctggaagcc gcagctgttc cacctggacc ccatcaccca ggagtggcac taccgatacg
1621 aggaccacag cccctgggac cccctgaagg acatcgccca gtttgagcaa gacgggatcc
1681 tgcggacctt gcagcaggag gccgtggccc gccagaccac cttcctgggc agcccagggc
1741 ccaggcacga gaggtctggc ccagaccagc ggcttcgcaa ggccagcgac cagccctccg
1801 gccacagcca ggccacggag agcagcggat ccacgcctga gtcctgccca gagctctcag
1861 acgaggagca ggatggtgac tttgtccctg gcggtgagag cccatgccct cggtgcagga
1921 aggaggcgcg gcggctgcag gccctgcacg aggccatcct ctccatccga gaggcccagc
1981 aggagctgca caggcacctc tcggccatgc tgagctccac ggcacgggca gcacaggcac
2041 cgaccccagg cctcctgcag agcccccgat cctggttcct gctctgcgtg ttcctggcgc
2101 gtcagctgtt cattaaccac atcctcaaat aggagccctg ggggcagagc tcctggccag
2161 tcccgagccc tccctcccag gcacccagca ctttaagcct gctccatgga ggcagagagg
2221 cccggcaagc acagccactg tgacggggag tccaggcgca ggagggaccc ggggccacaa
2281 ggcgctgcgg gcccaggtgt gctgggcccc tctcaggggc actggcctct ctgcagggcc
2341 ttccgcccag cgctggcctt aatgctaaag ccaaatgcag cttctgctgt gcgacgcact
2401 cctggccatc ttgccgtgtc accccctgtc cggcctccac ttgccatggg ggatggatgg
2461 atttagggtg ggagggcctg tgggggccct ggacagtcac accccagcag cagtgagtgg
2521 gcaggtttgg aggagcagcc agggagcccc gagtggccca ggagtccccc cacacacaga
2581 tgcataggcc tgccttccgg agaccctgtc cacattgccg ggaccaccct ggtggggcca
2641 ctggtgggcg ccagggacag gttagggcca ctctggggaa ggcattttgg ttttttattc
2701 cacgctctgc tgtttggatg ggagccccac agaggcaggt cctggaacca ccccaccccc
2761 acacctggac gctcgctctg gtgggggcac acgcaggtgg aggtggttgt gggtgcaggt
2821 gtgtgcaggg gtgtgggggg cgcaggggtg tggcttagct ggccccgcac ccaggccggg
2881 gaggctcaag ttcgccactt tactcagacc gatgcacagt cttcccattt tacacttttt
2941 taataaacat aattgcaata ttttaggtgg gctgcgagct gcagtcagcc ttcacgtctg
3001 gcctcagtcc ccgtgtcagt gccgctctgc gtgtgcgtgt gcgcgtgtgt gagcctctac
3061 acatatatat atgtacagag ccttaaacca catcgtggcg gtgccgtctg agctgtagcg
3121 ggtggctttg tttccagttt ttgtacccgt gtccttgtct cccctcctcc cccatctggg
3181 gatgtgtctg tgttccacac cttgaaataa acagacacat acgtgttct
//