LOCUS AK055598 2386 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31036 fis, clone HSYRA2000135, highly similar
to F-box only protein 42.
ACCESSION AK055598
VERSION AK055598.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2386)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2386
/cell_type="synoviocytes from rtheumatioid arthritis
(HS-RA)"
/clone="HSYRA2000135"
/clone_lib="HSYRA2"
/db_xref="H-InvDB:HIT000012212"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, synoviocytes from rtheumatioid
arthritis"
/organism="Homo sapiens"
CDS 218..2371
/codon_start=1
/note="highly similar to F-box only protein 42"
/protein_id="BAG51542.1"
/translation="MASSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHN
RSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNI
QWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKE
WIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKN
WWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNIS
GPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEH
GAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQ
SPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAA
VGGSSLDSPVQAISPSTPSAAEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKP
ASSSNPMDGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAM
SSKGPSASAALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHH
PPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVV
QGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR"
BASE COUNT 556 a 648 c 647 g 535 t
ORIGIN
1 agcagcagct gcggcggcgg cggcgtttga gtggaggaag atggcggctc cgggcggctc
61 ggggtcccgc cagctgtgag gagccccgag cacggctgtc gcggcctgag gcagagcgcc
121 tctgctctgg ccctgtccct ggctccctca ttaccgtcgc cagcggagcg aacccgagag
181 cgtggagcgg gctgggccag ctgttgagtg gaatgtcatg gccagctcct cggacagtga
241 agatgacagt ttcatggctg tggaccagga agaaactgtg ctggaaggga caatggatca
301 agatgaggag ccccacccag tattggaggc tgaggagact agacataata ggtccatgtc
361 ggagctgcca gaagaggttt tggagtatat cctgtccttt ctctcaccgt atcaggaaca
421 caaaactgcg gcccttgtct gcaaacagtg gtatcgactt atcaaaggtg tagcccatca
481 gtgttatcat ggtttcatga aggctgtcca ggaaggaaac attcagtggg agagccgtac
541 ctatccttat cctggaaccc caatcactca gcgcttctcg cacagtgcat gctattatga
601 tgctaatcag tctatgtatg tgtttggagg ctgtacccag agcagctgca atgctgcttt
661 caatgacctc tggagacttg acctaaacag caaagagtgg atccgacctt tggcttcagg
721 gtcctatcct tcccccaaag ctggagcaac tctggtcgtg tacaaggact tgctagtgct
781 gtttggcggc tggacgcggc caagccctta tcccctacac cagccagaga gattctttga
841 tgaaatacac acttactcac cctctaaaaa ttggtggaac tgcattgtga caacccatgg
901 gccacctccc atggctggcc actcctcctg tgtgatagat gataaaatga ttgtctttgg
961 tggctcttta ggatcccggc aaatgagcaa tgatgtctgg gtccttgacc ttgagcagtg
1021 ggcgtggtcc aagccgaaca tctctggccc cagtcctcat cctcgaggtg gccaatctca
1081 gattgtcata gatgatgcaa ctatcttaat cctcggaggg tgtggcggtc ccaatgctct
1141 attcaaggat gcttggttgt tgcacatgca ttctggtcct tgggcctggc agccactcaa
1201 ggtagaaaat gaagagcatg gggccccaga actgtggtgc catccagctt gccgggtggg
1261 acagtgtgtg gtggtcttca gccaggctcc tagtgggaga gccccactca gccccagttt
1321 gaactctcgc ccatcaccta tcagtgccac tcctccagct ctcgttcctg aaacccgaga
1381 gtaccgctct cagtctccag taagaagcat ggatgaagct ccttgtgtta acggccgctg
1441 gggaacactg agacccaggg ctcaaaggca gactccttca ggttcccggg aagggagcct
1501 ttccccagcc agaggagacg gctctcctat cctcaatggc gggagtttgt ctccaggaac
1561 ggcagctgtg ggtggctctt ctttggacag tcctgtacag gccatatctc caagtactcc
1621 atctgctgct gaaggatacg acctgaaaat aggactttct ttggcccccc gacgaggatc
1681 actaccagat cagaaagatc tgagattagg atccatagat ctgaattggg atctgaaacc
1741 cgcttccagt agtaatccca tggatggcat ggacaatagg acagttgggg gaagtatgag
1801 acaccctcct gaacagacaa atggtgtgca taccccacct cacgtggcca gtgcccttgc
1861 aggggccgtc tccccaggtg ccctgcgtcg gagtctggaa gccatcaaag cgatgtcctc
1921 caaaggcccc tcggcctctg cagcactaag tcctcctctt gggtcttctc caggctctcc
1981 tgggagccag agtttgagca gtggagaaac agtgcccatc cctcgcccag ggcctgccca
2041 aggagatgga cattccttac ctcccattgc tcgccgcctg ggccaccacc ctccacagtc
2101 cctaaatgtt ggcaaacccc tataccagag tatgaactgc aagcccatgc agatgtacgt
2161 gctggacatt aaagacacca aggagaaggg gcgggtcaaa tggaaagtat ttaatagcag
2221 ttctgtggtt ggacctcctg aaaccagcct gcataccgtg gtacaaggca ggggtgaact
2281 catcatattt ggaggactca tggacaagaa acagaatgtg aagtactatc caaaaacaaa
2341 cgccttgtac tttgtacgag caaagagata atgtgttcta aacccc
//