LOCUS AK055545 2973 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30983 fis, clone HHDPC2000455, weakly similar
to H.sapiens PTPL1 mRNA for protein tyrosine phosphatase.
ACCESSION AK055545
VERSION AK055545.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2973)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2973
/cell_type="dermal papilla cells (HDPC)"
/clone="HHDPC2000455"
/clone_lib="HHDPC2"
/db_xref="H-InvDB:HIT000012159"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, dermal papilla cells"
/organism="Homo sapiens"
CDS 197..2065
/codon_start=1
/protein_id="BAB70950.1"
/translation="MNKLNFHNNRVMQDRRSVCIFLPNDESLNIIINVKILCHQLLVQ
VCDLLRLKDCHLFGLSVIQNNEHVYMELSQKLYKYCPKEWKKEASKVRQYEVTWGIDQ
FGPPMIIHFRVQYYVENGRLISDRAARYYYYWHLRKQVLHSQCVLREEAYFLLAAFAL
QADLGNFKRNKHYGKYFEPEAYFPSWVVSKRGKDYILKHIPNMHKDQFALTASEAHLK
YIKEAVRLDDVAVHYYRLYKDKREIEASLTLGLTMRGIQIFQNLDEEKQLLYDFPWTN
VGKLVFVGKKFEILPDGLPSARKLIYYTGCPMRSRHLLQLLSNSHRLYMNLQPVLRHI
RKLEENEEKKQYRESYISDNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSS
HTSGIEADTKPRDTGPEDSYSSSAIHRKLKTCSSMTSHGSSHTSGVESGGKDRLEEDL
QDDEIEMLVDDPRDLEQMNEESLEVSPDMCIYITEDMLMSRKLNGHSGLIVKEIGSST
SSSSETVVKLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAGLCQDTA
QSYTFGCGHELDEEGLYCNSCLAQQCINIQDAFPVKRTSKYFSLDLTHDEVPEFVV"
BASE COUNT 858 a 664 c 687 g 764 t
ORIGIN
1 agaggggtga ccagagagcc caacgcctgg tgctcaagac tttctccgag ctatgaaacc
61 cacgtagtcg aacaccgtga tgcttctcct gcagggcgtg tgatgaggag gcgagcttgg
121 ctttggagtg ctgggaacct gaggaattgc caaggaccca gagcccagcc ctgaccacca
181 gagtgcccaa aacacaatga acaaattgaa ttttcataac aacagagtca tgcaagaccg
241 ccgcagtgtg tgcattttcc ttcccaacga tgaatctctg aacatcatca taaatgttaa
301 gattctgtgt caccagttgc tggtccaggt ttgtgacctg ctcaggctaa aggactgcca
361 cctctttgga ctcagtgtta tacaaaataa tgaacatgtg tatatggagt tgtcacaaaa
421 gctttacaaa tattgtccaa aagaatggaa gaaagaggcc agcaaggtac gacaatacga
481 agtcacttgg ggtatcgacc aatttgggcc tcctatgatc atccacttcc gtgtgcagta
541 ctatgtggaa aatggcagat tgatcagtga cagagcagca agatactatt attactggca
601 cctgagaaaa caagttcttc attctcagtg tgtgctccga gaggaggcct acttcctgct
661 ggcagccttt gccctgcagg ctgatcttgg gaacttcaaa aggaataagc actatggaaa
721 atacttcgag ccagaggctt acttcccatc ttgggttgtt tccaagaggg ggaaggacta
781 catcctgaag cacattccaa acatgcacaa agatcagttt gcactaacag cttccgaagc
841 tcatcttaaa tatatcaaag aggctgtccg actggatgac gtcgctgttc attactacag
901 attgtataag gataaaaggg aaattgaagc atcgctgact cttggattga ccatgagggg
961 aatacagatt tttcagaatt tagatgaaga gaaacaatta ctttatgatt tcccctggac
1021 aaatgttgga aaattggtgt ttgtgggtaa gaaatttgag attttgccag atggcttgcc
1081 ttctgcccgg aagctcatat actacacggg gtgccccatg cgctccagac acctcctgca
1141 acttctgagc aacagccacc gcctctatat gaatctgcag cctgtcctgc gccatatccg
1201 gaagctggag gaaaacgaag agaagaagca gtaccgggaa tcttacatca gtgacaacct
1261 ggacctcgac atggaccagc tggaaaaacg gtcgcgggcc agcgggagca gtgcgggcag
1321 catgaaacac aagcgcctgt cccgtcattc caccgccagc cacagcagtt cccacacctc
1381 gggcattgag gcagacacca agccccggga cacggggcca gaagacagct actccagcag
1441 tgccatccac cgcaagctga aaacctgcag ctcaatgacc agtcatggca gctcccacac
1501 ctcaggggtg gagagtggcg gcaaagaccg gctggaagag gacttacagg acgatgaaat
1561 agagatgttg gttgatgacc cccgggatct ggagcagatg aatgaagagt ctctggaagt
1621 cagcccagac atgtgcatct acatcacaga ggacatgctc atgtcgcgga agctgaatgg
1681 acactctggg ttgattgtga aagaaattgg gtcttccacc tcgagctctt cagaaacagt
1741 tgttaagctt cgtggccaga gtactgattc tcttccacag actatatgtc ggaaaccaaa
1801 gacctccact gatcgacaca gcttgagcct cgatgacatc agactttacc agaaagactt
1861 cctgcgcatt gcaggtctgt gtcaggacac tgctcagagt tacacctttg gatgtggcca
1921 tgaactggat gaggaaggcc tctattgcaa cagttgcttg gcccagcagt gcatcaacat
1981 ccaagatgct tttccagtca aaagaaccag caaatacttt tctctggatc tcactcatga
2041 tgaagttcca gagtttgttg tgtaaagtcc gtctgtgtgc agctgtacag gcagcttact
2101 gtttgctaga ggatgcgaaa gtcataagtt ctttacatat tacttgtgcc atatcttctt
2161 caccctaaac atagctcttt ctttataata tttgtgatga tggaaacaaa agccttggaa
2221 caattgcact ttaagtatta cacagaagta aaagaactac agaaaatgta cagcaagaca
2281 agtgcccgga agttcactga tccttcagaa ggaaatgcgc tttactgatt gcaaagcctt
2341 cagaatattg gagtgtggtg tgtttgctca tctgatgctt tttagttcag ttacatgtaa
2401 catcacattt ttttatcacg tgaaagatgt tagatttgtt tgcttataaa ttttttacca
2461 ctcccacata aaatgctcat agtttgggag aggaaagagg gaagattctc tcttctttta
2521 acagagagat gattgctctg tatacccatt gcttcctccc tgaggctgtc ccaaagtgaa
2581 cactgatgga gtggtcaaaa tcataaggtt gtagcaagcc aaagatacgt atgtgacaga
2641 agcacataag caataagcag aaaaccagaa gtgcatgctg tgatgcctgt gactccttca
2701 tcccgctcag tgccatgtcc tcttttgtga tcttccagaa agctccagga ttcatttgag
2761 ttccacatcc aagtaacaga tgaattatat tcatgttgta atgcattttg tggagtttac
2821 aaaaccagtg tctgttaaaa ctttggaaaa tgtcttagaa aatgttggtg cttggtgatg
2881 ctttatttgt ttaattatca agaacaaatt atggcaatgc tagtttctgc ttaaccaaaa
2941 tactctgtgt atatattata catatataaa tac
//