LOCUS AK055486 2811 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30924 fis, clone FEBRA2006521, highly similar
to Junctophilin-3.
ACCESSION AK055486
VERSION AK055486.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2811)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2811
/clone="FEBRA2006521"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000012100"
/db_xref="taxon:9606"
/dev_stage="fetus"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 47..1318
/codon_start=1
/note="highly similar to Junctophilin-3"
/protein_id="BAG51525.1"
/translation="MTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEA
AERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEEARIARITAKEFSPSFQHRE
NGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPA
ATPPPAPAARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVR
SGALRGGLLVDDFRTRGSGRKQPGNPKPRERRTESPPVFTWTSHHRASNHSPGGSRLL
ELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPEDRGFGVQRLRSKA
QNKENFRPASSAEPAVQKLASLRLGGAEPRLLRWDLTFSPPQKSLPVALESDEENGDE
LKSSTGSAPILVVMVILLNIGVAILFINFFI"
BASE COUNT 574 a 875 c 848 g 514 t
ORIGIN
1 gtacgagggc gagtgggcca gcaaccggcg ccatggctac ggctgcatga ccttcccgga
61 cggcaccaag gaggagggca agtacaagca gaacatcctc gtcggcggca agcgcaagaa
121 cctcatcccc ctgcgggcca gcaagatccg cgagaaggtg gaccgcgccg ttgaggccgc
181 tgagcgggcc gccaccatcg ccaagcagaa ggctgagatc gcggcttcca ggacctccca
241 ctctcgggca aaggccgagg cagccctcac agcagctcag aaagcccagg aggaggcgcg
301 gatcgccagg atcactgcca aagagttctc cccttccttc cagcaccggg aaaacgggct
361 ggagtaccag aggccgaagc gtcagacctc ctgtgacgac atcgaggtgc tgtccaccgg
421 gacacccctg cagcaggaga gccccgagct gtaccgcaag ggcaccactc cctccgacct
481 gacccccgac gacagccccc tgcagagctt ccccaccagc cccgcggcca ccccgccgcc
541 cgcgcccgcc gccaggaaca aggtcgccca cttctcgagg caggtgtcgg tggacgagga
601 gcggggcggg gacatccaga tgctcctgga gggccgggcc ggggactgcg cccgcagcag
661 ctggggcgag gagcaggccg ggggctccag gggtgtccgc agcggtgccc tgcgcggcgg
721 cctgctcgtg gatgacttcc gcacccgagg ttcgggccgc aagcagcccg ggaaccccaa
781 gccgcgggag cggcggacgg agtcaccccc cgtgttcacg tggacttccc accaccgggc
841 cagcaaccac agccccggag gctccaggct gctggagctg caggaggaga agctgagcaa
901 ctaccggatg gagatgaaac ccttgctgag gatggagacg catccccaga aaagacgcta
961 cagcaagggc ggcgcctgcc ggggcttggg ggacgaccac cgccccgagg accggggctt
1021 cggggtgcag agactgcggt ccaaggccca gaacaaggag aacttcaggc cggcctcctc
1081 cgcggagccc gccgtgcaga aactggcgag cctgcggctg ggcggggccg agccccggtt
1141 gctgcgttgg gacttgacct tctccccgcc ccagaaatcc ttgcctgtcg ctctagagtc
1201 cgacgaggag aatggggatg agctcaagtc cagtacgggc tcagcgccta tcctggtggt
1261 catggtgatc ttgctcaaca tcggagtcgc cattctgttt attaactttt tcatctgatg
1321 agatgtcgcg gtagcaaaaa tagagaaagg gtagaaaaga gggacattaa aattaaaagc
1381 aaaaccacaa gaagggaaag accgcaactc ggacagccca gcgacttcca agtcctctca
1441 cagaagaacc acacgattgg gtatcactca cagtttgcct ttttttctgg gtaatgtttt
1501 ttggatttta gccaaaattc tttgcttgta taacactctg ctgtgtggca tggcagaagg
1561 aggccagcac gcagcccctc cagccccacg tggagacaga agggatcccg gcacatcagt
1621 ggtaacagcg gacgttgtcc tcgtggtcac acgtcccgtc ttgggtgtgg atggagggca
1681 gcccggggca gagcctcagc cccgcggccc ctgagtggca gggctgactc ccgtcgacac
1741 gagcttagaa agtggattca ctgctttctc tgtctagaac agacgggtga caagtatggg
1801 caggaggcat ggggcagggt ggcccacccc agtgggcagt agcctggcct ttttctgtgt
1861 gagatctgtg ctgcacacct gagggagggg gagggatcgg ccacctcctc cctgtgagac
1921 ggatgcaggt ccttccctct tctcggcact gcccccggcc ttccatgaga agccgactcc
1981 ccacaccgag ttttaaagca aagccctttt cttctgctgc ccactcactg tgggtcccat
2041 tcggctgttt cccccaccag accccaggga agccggggcc cactccgatc cgcctgggct
2101 cagctaagca cggaagccaa gggggctgtg ccgtggagct gggctcgcgc cggggctctg
2161 ggtgtgtgcg cttggcgtgc agggtggacg cgtggggttc cgtgtcccca gcagtgaggg
2221 ccctagagga cgccttctcc catggttact gatctccacg ggttttcaca tctctgtact
2281 gtgcctgcct caacttcccc taacagatat gcatattcct tccagatgcc tcagtgctac
2341 accacagtgg gcctggtccc aggacaggaa tgcggttcaa acccagtggc ttgaaacttc
2401 ctgagaaact gtagcatatc cagcccccta aaatgtacaa tgtaacttgt tcagtccaac
2461 aaaaacaggt tccttatgtt tctgccttct ccaccagggt cgctccatca cccaaacaaa
2521 agaacaaggt ttgccaggat gtccgagtgc cccctggccc tggctctcgt gtgcatggac
2581 gtgcctgagg ggtccgggca cggccatacg caggacccct gtgcccgggg aggcgctgca
2641 gggattcccc atccggtcgt cttggggcca gcccgtctta tggactctgc cttgctttgc
2701 ttatgtttag ctgtttctct gctacctttc gagcagactt ctttactaca ctgcactgga
2761 ttgctatatt tttaaccaga aataaactaa agattagagc atgttccagt t
//