LOCUS AK055484 2316 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30922 fis, clone FEBRA2006485, highly similar
to Rattus norvegicus m-tomosyn mRNA.
ACCESSION AK055484
VERSION AK055484.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2316)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2316
/clone="FEBRA2006485"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000012098"
/db_xref="taxon:9606"
/dev_stage="fetus"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 145..1341
/codon_start=1
/protein_id="BAB70930.1"
/translation="MSRKLSLPTDLKPDLDVKDNSFSRSRSSSVTSIDKESREAISAL
HFCETFTRKTDSSPSPCLWVGTTLGTVLVIALNLPPGGEQRLLQPVIVSPSGTILRLK
GAILRMAFLDTTGCLIPPAYEPWREHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQ
YAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSICLACFCANGHIMTF
SLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQETCENLQEM
LGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGI
EGVKGAASGVVGELARARLALDERGQKLGDLEERTAAMLSSAESFSKHAHEIMLKYKD
KKWYQF"
BASE COUNT 689 a 441 c 513 g 673 t
ORIGIN
1 gaattatatg gctctaatga tccttatcgg agagaacccc gatctcctcg taaatctcga
61 cagccttcag gagccggtct gtgtgatatt agtgaaggga ctgttgttcc agaggatcgc
121 tgcaaatctc caacctctgc aaagatgtca aggaagttaa gcttacctac tgacctaaag
181 cctgatttag atgtaaagga taactccttt agccgatcac ggagttcaag tgtaacaagc
241 attgacaaag aatcccgaga ggcgatctcc gctcttcatt tctgtgaaac gtttactcga
301 aagacggact cgtccccttc cccttgtctg tgggttggaa caacgctagg aacagtgctt
361 gtcattgcac tgaaccttcc cccaggggga gagcaaagac ttcttcagcc agtaattgtg
421 tctccaagtg gtactatatt gaggttaaaa ggtgcaatct tgagaatggc atttctggat
481 accacaggct gcttaatacc acctgcgtat gaaccctgga gagagcacaa tgttcctgaa
541 gaaaaagacg aaaaggagaa attgaaaaaa cggcggcctg tctcagtatc cccctcctct
601 tctcaggaaa ttagtgaaaa ccagtatgca gtgatatgtt ctgaaaagca agcaaaagta
661 atctcactgc caacccagaa ctgtgcttat aagcaaaata ttacagagac ctcgtttgtg
721 cttcgtggag atattgtagc attgagtaac agtatctgcc ttgcctgttt ctgtgccaat
781 ggacatataa tgacttttag tttgccaagt ttaagacctc tgttggatgt gtattacttg
841 ccccttacca atatgcggat agccagaacg ttctgcttta ccaacaatgg acaagcatta
901 taccttgttt cacctacaga aatccagaga cttacttata gtcaagagac ctgtgaaaat
961 cttcaggaaa tgttgggtga actcttcact cctgtagaaa cacctgaagc accaaacagg
1021 ggattcttta aaggcttatt tggaggtggt gcacaatctc ttgacagaga agaactattt
1081 ggagaatcgt cctcaggaaa ggcttcaagg agccttgcac agcatattcc tggccctggt
1141 ggcattgaag gcgtaaaagg ggcagcatct ggagttgttg gtgaattagc acgagccagg
1201 ctggcactag atgaaagagg gcagaaactt ggcgatctgg aagaaagaac tgcggccatg
1261 ttatcaagtg cagagtcatt ttctaaacat gctcatgaga ttatgttgaa atacaaagat
1321 aagaagtggt accagttctg acaaccagaa tccaataagt ccaacttcag ccagaaggaa
1381 aaaagttttc catttttatt acattcttta ggaaagttaa cgttaaaggg atgttcgtca
1441 ctgaatactg ttctttccta gcacagtcat gcactgtttt acctcagtca tgtggcttta
1501 actgaggagt gttcacacgc actcgaaatg gagtatatgg tgtgtgccag ttatgagttg
1561 accatttggg aattaaacag gtcacacgtg acagatgaag aaaccaaggg ggctgctgag
1621 gagacctggt gcagggacta atcctggatc attcctgtat taaactttca tatgccaaaa
1681 gggtttgtgc cgttttatct gccatcagtg tttgacctgt ttagggcaga ggcaataagt
1741 cagaagtctt gaagttgaaa tagttatatg tgtgtcattg gactggatta taaacagctg
1801 tcttggactt tccctctctt aacactgact ggtcatcagt atcattagtg aaaaagaaac
1861 aaattgtttg ttatcatctc tttagacaga taagctgaat ggtgggcttt aaataataaa
1921 aacatacaca tagttgactt gtgtatgagc tactcttgga ttcttgttat tatagacttg
1981 tatttagttc atattttgtc aaaagcaaaa caagaagata catcactttt cattgaaaag
2041 aaaagtgtag agcatgactg aattgctcat cattctggga gtttccatgt agtggctatg
2101 cagtgtggaa agtgagaaaa acctccattg tggtgaggag aatacttcaa tgtcccttgt
2161 ccttgttctc attaattcag ctaaaggtgg atttgaccaa aataatgctg gttaaatttg
2221 tagaaatgtt gaaattggct gtgttttaaa ttttgcttga atttttataa aatgtttaac
2281 caaatgtacc tttgcattct ttaattaaaa ttgctt
//