LOCUS AK055403 2464 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30841 fis, clone FEBRA2002508, highly similar
to Optineurin.
ACCESSION AK055403
VERSION AK055403.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2464)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K.
and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2464
/clone="FEBRA2002508"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000012017"
/db_xref="taxon:9606"
/dev_stage="fetus"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 674..2407
/codon_start=1
/note="highly similar to Optineurin"
/protein_id="BAG51512.1"
/translation="MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQM
KELLTENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSH
ENEKLKEELGKLKGKSERSSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGI
VSELQLKLNSSGSSEDSFVEIRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRS
ADGAKNYFEHEELTVSQLLLCLREGNQKVERLEVALKEAKERVSDFEKKTSNRSEIET
QTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKC
QALERKNSAIPSELNEKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLTVLQMT
HNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEMKQT
IAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFED
GGRQSLMEMQSRHGARTSDSDQQAYLVQRGAEDRDWRQQRNIPIHSCPKCGEVLPDID
TLQIHVMDCII"
BASE COUNT 760 a 556 c 647 g 501 t
ORIGIN
1 atccctgcag cgctacccgg gtactctgga tgcacatagg gcggctctcg ctcctacctt
61 gtcatcctgc tgtctaatcc gggggcagct tccctcctcc acaccagcag aggctattct
121 tcagcaacaa gaatagccga gcctattcgt ccgcaacaag agcccaagaa gcatcctgca
181 ggctttctgc tttttgagtg tattttaaag caaaaacgag tggaaagcta tgtatgctca
241 gttaactatg tctagatgtt aacctttttt caaaaaacac agatggaggc ctccctccga
301 ggatgcctgg cattctcctc tttctgtggg cggcagcgac cccctgcggc tccagcctcc
361 actacgggat ctgcgggaag acacggggaa gacgaactcc gcacactgca tttgattaat
421 gatttatttt gattaacgcc gtcacagtga cgccttagag cagtccctgt tcacccgggt
481 cccagcctcg accccgcacg gacagcgagg gtgtggcttt gatagctggc ggtgccactt
541 cctggccttg gatgagccgt acgcctctgt aaacccaact tcctcacctt tgaaacagct
601 gcctggttca gcattaatga agattagtca gtgacaggcc tggtgtgctg agtccgcaca
661 tagaacttct gcaatgtccc atcaacctct cagctgcctc actgaaaagg aggacagccc
721 cagtgaaagc acaggaaatg gaccccccca cctggcccac ccaaacctgg acacgtttac
781 cccggaggag ctgctgcagc agatgaaaga gctcctgacc gagaaccacc agctgaaaga
841 agccatgaag ctaaataatc aagccatgaa agggagattt gaggagcttt cggcctggac
901 agagaaacag aaggaagaac gccagttttt tgagatacag agcaaagaag caaaagagcg
961 tctaatggcc ttgagtcatg agaatgagaa attgaaggaa gagcttggaa aactaaaagg
1021 gaaatcagaa aggtcatctg aggaccccac tgatgactcc aggcttccca gggccgaagc
1081 ggagcaggaa aaggaccagc tcaggaccca ggtggtgagg ctacaagcag agaaggcaga
1141 cctgttgggc atcgtgtctg aactgcagct caagctgaac tccagcggct cctcagaaga
1201 ttcctttgtt gaaattagga tggctgaagg agaagcagaa gggtcagtaa aagaaatcaa
1261 gcatagtcct gggcccacga gaacagtctc cactggcacg gcattgtcta aatataggag
1321 cagatctgca gatggggcca agaattactt cgaacatgag gagttaactg tgagccagct
1381 cctgctgtgc ctaagggaag ggaatcagaa ggtggagaga cttgaagttg cactcaagga
1441 ggccaaagaa agagtttcag attttgaaaa gaaaacaagt aatcgttctg agattgaaac
1501 ccagacagag gggagcacag agaaagagaa tgatgaagag aaaggcccgg agactgttgg
1561 aagcgaagtg gaagcactga acctccaggt gacatctctg tttaaggagc ttcaagaggc
1621 tcatacaaaa ctcagcgaag ctgagctaat gaagaagaga cttcaagaaa agtgtcaggc
1681 ccttgaaagg aaaaattctg caattccatc agagttgaat gaaaagcaag agcttgttta
1741 tactaacaaa aagttagagc tacaagtgga aagcatgcta tcagaaatca aaatggaaca
1801 ggctaaaaca gaggatgaaa agtccaaatt aactgtgcta cagatgacac acaacaagct
1861 tcttcaagaa cataataatg cattgaaaac aattgaggaa ctaacaagaa aggagtcaga
1921 aaaagtggac agggcagtgc tgaaggaact gagtgaaaaa ctggaactgg cagagaaggc
1981 tctggcttcc aaacagctgc aaatggatga aatgaagcaa accattgcca agcaggaaga
2041 ggacctggaa accatgacca tcctcagggc tcagatggaa gtttactgtt ctgattttca
2101 tgctgaaaga gcagcgagag agaaaattca tgaggaaaag gagcaactgg cattgcagct
2161 ggcagttctg ctgaaagaga atgatgcttt cgaagacgga ggcaggcagt ccttgatgga
2221 gatgcagagt cgtcatgggg cgagaacaag tgactctgac cagcaggctt accttgttca
2281 aagaggagct gaggacaggg actggcggca acagcggaat attccgattc attcctgccc
2341 caagtgtggg gaggttctgc ctgacataga cacgttacag attcacgtga tggattgcat
2401 catttaagtg ttgatgtatc acctccccaa aactgttggt aaatgtcaga ttttttcctc
2461 caag
//