LOCUS AK055154 2352 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30592 fis, clone BRAWH2008706, highly similar
to Chondroitinbeta-1,4-N-acetylgalactosaminyltransferase 1 (EC
2.4.1.174).
ACCESSION AK055154
VERSION AK055154.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2352
/clone="BRAWH2008706"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000011768"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 1160..2053
/codon_start=1
/note="highly similar to
Chondroitinbeta-1,4-N-acetylgalactosaminyltransferase 1
(EC 2.4.1.174)"
/protein_id="BAG51476.1"
/translation="MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLA
LPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASD
AAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLE
TGLTRHPEEKPVRKDKRDELVEAIESALETLNNPAENSPNHRPYTASDFIEGIYRTER
DKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKF
RQFMQNFRPADEVFRCVPLSP"
BASE COUNT 528 a 594 c 648 g 582 t
ORIGIN
1 attctgcttt tatctagttg acacatcggt ttcctccatt gatattccta aaaggaaggg
61 acggctgggg cccgttgtca ctccctgcaa ggcgcaatct ccaggcaggg gcagggcagg
121 tctgggggct tcacgccccc cagggagcgg gtcacccggt gggactcgcg cccgccctct
181 ccttgggtgt cgtgttccct gggacgcgcc caccgttctc cctggggagc gggaggctcc
241 aggcgcggct ggggcgctgt gggcagatgc gctcggtcct caccagcggc gttgtgcggc
301 gaaccctgcg gtgcttcggg aaggcggtcg ttcctccctg ctcccaccgt tttccagcgt
361 gtgcgctctt accttctctg gggaaaaaag gaaatttttt attttttaac atttcatttc
421 atgaaaccgt tttttttaag tggtggcgct gaacacagtc cttgcagagg ggggcagcac
481 tttccctcct gaccccaacc tggaaacccc agtgtgactt cagcgctgtc agagcattgg
541 aagcagagct gcgagttagg aagcggctcg ctggcagctg ggcacgtttc tttcctgcga
601 gatcggcttt tttgatttgc tctttttcac atgaaaatgt tcagcttcat ttttagacac
661 ctttagacat ggttatcact gtttaaagcc ttgatttttt tttaaacaaa tagtttgcat
721 tttattcatt gaaacaggga gagaacaaat accatcctgc tttttgggct gccttcctat
781 ttcaaggaaa gacgccaagg taattttgac ccagaggagc aatgatgtag ccacctccta
841 accttccctt cttgaacccc caggtcccct cttgctgttg gctgcacatc aggaaggctg
901 tgatgggaat gaaggtgaaa acttggagat ttcacttcag tcattgcttc tgcctgcaag
961 atcatccttt aaaagtagag aagctgctct gtgtggtggt taactccaag aggcagaact
1021 cgttctagaa ggaaatggat gcaagcagct ccgggggccc caaacgcatg cttcctgtgg
1081 tctagcccag ggaagccctt ccgtgggggc cccggctttg agggatgcca ccggttctgg
1141 acgcatggct gattcctgaa tgatgatggt tcgccggggg ctgcttgcgt ggatttcccg
1201 ggtggtggtt ttgctggtgc tcctctgctg tgctatctct gtcctgtaca tgttggcctg
1261 caccccaaaa ggtgacgagg agcagctggc actgcccagg gccaacagcc ccacggggaa
1321 ggaggggtac caggccgtcc ttcaggagtg ggaggagcag caccgcaact acgtgagcag
1381 cctgaagcgg cagatcgcac agctcaagga ggagctgcag gagaggagtg agcagctcag
1441 gaatgggcag taccaagcca gcgatgctgc tggcctgggt ctggacagga gccccccaga
1501 gaaaacccag gccgacctcc tggccttcct gcactcgcag gtggacaagg cagaggtgaa
1561 tgctggcgtc aagctggcca cagagtatgc agcagtgcct ttcgatagct ttactctaca
1621 gaaggtgtac cagctggaga ctggccttac ccgccacccc gaggagaagc ctgtgaggaa
1681 ggacaagcgg gatgagttgg tggaagccat tgaatcagcc ttggagaccc tgaacaatcc
1741 tgcagagaac agccccaatc accgtcctta cacggcctct gatttcatag aagggatcta
1801 ccgaacagaa agggacaaag ggacattgta tgagctcacc ttcaaagggg accacaaaca
1861 cgaattcaaa cggctcatct tatttcgacc attcggcccc atcatgaaag tgaaaaatga
1921 aaagctcaac atggccaaca cgcttatcaa tgttatcgtg cctctagcaa aaagggtgga
1981 caagttccgg cagttcatgc agaatttcag gcctgctgat gaagttttta gatgtgtgcc
2041 tttaagccct tgattgtgcg gtgttggatc ttagaagctg tgatggctca gatgcacata
2101 ttggctgagg ataaccagct aagtgatttc accagcttgt tttaaacata gaaaatccta
2161 ctgtctaatt ataaatcttg aaagatcaag ctgatttttt atttcttttt ttttgagatg
2221 gagtcttact ctgtcaccca ggctggagtg cagtggcacg aactctgctc actgcaacct
2281 tcacctccca ggttcaggga gatgtgcatt gagcaggatg ggagagtcca tctcactgtt
2341 gtttactttg gg
//