LOCUS AK055061 2636 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30499 fis, clone BRAWH2000443, weakly similar
to Human breast cancer, estrogen regulated LIV-1 protein (LIV-1)
mRNA.
ACCESSION AK055061
VERSION AK055061.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2636)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2636
/clone="BRAWH2000443"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000011675"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 222..2186
/codon_start=1
/protein_id="BAB70848.1"
/translation="MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPA
DLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNF
EDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLS
QNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQ
GVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQR
KQNNIITHDQGYSNFSSSMEKESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFK
QMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHS
CEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAPEFGHFHESKGHIWKLMG
LIGGIHGFFLIEKCFILLVSPNDKKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMIL
VGDSLHNFADGLAIGAAFSSSSESGVTTTIAILCHEIPHEMGDFAVLLSSGLSMKTAI
LMNFISSLTAFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQTQRP
WMMFLLQNFGLILGWLSLLLLAIYEQNIKI"
BASE COUNT 768 a 574 c 522 g 772 t
ORIGIN
1 aaaataatcc tctctagctc ccagtgcaca gtcaaagaat tttaaaaaca gggaactttg
61 taactgtgaa atactctcca ggatttaaaa ggctgtggag ctccagataa agaatcgttt
121 atctttcttc tgaagaaatt cctttggtta caagtttacc ccataaacgg caacacactc
181 acctccatcc aagacagact caaggtggag gaagcgtgga aatgtgcttc cggacaaagc
241 tctcagtatc ctgggtgcca ttgtttcttc tactcagccg tgttttttct actgagacag
301 acaaaccctc agcccaggac agcagaagcc gtgggagttc aggccaaccg gcagacctgc
361 tacaggttct ctctgctggt gaccacccac cccacaacca ctcaagaagc ctcatcaaaa
421 cattgttgga gaaaactggg tgcccacgga ggagaaacgg aatgcaagga gattgcaatc
481 tgtgctttga accagatgca ctattactaa tagctggagg aaattttgaa gatcagctta
541 gagaagaagt ggtccagaga gtttctcttc tccttctcta ttacattatt catcaggaag
601 agatctgttc ttcaaagctc aacatgagta ataaagagta taaattttac ctacacagcc
661 tactgagcct caggcaggat gaagattcct ctttcctttc acagaatgag acagaagata
721 tcttggcttt caccaggcag tactttgaca cttctcaaag ccagtgtatg gaaaccaaaa
781 cgctgcagaa aaaatctgga atagtgagca gtgaaggtgc taatgaaagt acgcttcctc
841 agttggcagc catgatcatt actttgtccc tccagggtgt ttgtctggga caaggaaact
901 tgccttcccc agactacttt acagaatata ttttcagttc cttgaatcgt acgaataccc
961 tccgcctatc agaactagac caactcctca acactctctg gaccagaagt acttgtatca
1021 aaaatgagaa aatccatcaa tttcaaagga aacaaaacaa cataataacc catgatcagg
1081 gctattctaa tttctcttca tccatggaaa aagagtctga ggatggtcca gtttcctggg
1141 atcagacctg cttctctgct aggcagctgg tggagatatt tctacagaag ggcctctcac
1201 tcatttctaa ggaggacttt aagcaaatga gtccagggat catccagcag ctcctcagct
1261 gctcctgcca cttacccaag gaccaacaag caaagctgcc acctaccact ctggagaaat
1321 acggctacag cacggtggct gtcacccttc tcacactggg ctccatgctg gggacagcgc
1381 tggtcctttt ccatagctgt gaggagaact acaggcttat cttacagctg tttgtgggct
1441 tggccgtcgg gacactgtct ggggacgctc tgctccacct tatccctcag gttcttggtt
1501 tacataagca ggaagcccca gaatttgggc atttccatga aagcaaaggt catatttgga
1561 aactgatggg attaattgga ggcatccatg gatttttctt gatagaaaaa tgttttattc
1621 ttcttgtatc accaaatgac aagaaaagcc cagaagattc acaggcagct gaaatgccta
1681 taggcagtat gacagcctcc aacagaaaat gtaaagccat tagcttgtta gcaatcatga
1741 ttctggttgg ggacagcctg cataattttg cagatggcct agccatagga gcagccttct
1801 catcatcatc cgagtcagga gtgaccacta cgattgctat cttgtgtcat gaaatcccac
1861 atgaaatggg agactttgcc gtgctcttaa gctctggact ttctatgaag actgccatcc
1921 tgatgaattt tataagctcc ctaactgcct tcatgggatt atacattggc ctttccgtgt
1981 cagctgatcc atgtgttcaa gactggatct tcacagtcac tgctgggatg ttcttatatt
2041 tatccttggt tgaaatgctt cctgaaatga ctcatgttca aacacaacga ccctggatga
2101 tgtttctcct gcaaaacttt ggattgatcc taggttggct ttctctcctg ctcttggcta
2161 tatatgagca aaatattaaa atataagtga ggatcttcaa catctttcaa aaatgcattt
2221 atatagtctt actttgtttc tttcattgca ctctataatg atttttaaat taagaatttt
2281 ttatcttagg caaagtgtgt ctctttcaat tcattaactt attaatttta taatgcagtt
2341 ttatttttgg aaacatataa atatcagact gtccttaatt gaaattttgt ctttggtttc
2401 caacaccatg atgaagctct tgctttttaa aaagtagtta gtaaattctg catgaatttt
2461 agtaaacttt aaaaaataga ttttttccct aagaaagaat gtttgtagaa tttaaagtgg
2521 acagatgcct gttggggtaa aatcaactgc aactttttga tgttaatttt tttccctgtg
2581 caattataaa ctataagcaa gttaagtgac aagcaaatgt aataaagact agtttt
//