LOCUS AK054858 2682 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30296 fis, clone BRACE2003110, weakly similar
to PATCHED PROTEIN HOMOLOG 1.
ACCESSION AK054858
VERSION AK054858.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2682
/clone="BRACE2003110"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000011472"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 214..2565
/codon_start=1
/protein_id="BAB70816.1"
/translation="MLDQHHTDLILKLHAAVTKIQVPRPGFNYTFAHICILNNDKTCI
VDDIVHVLEELKNARATNRTNFAITYPITHLKDGRAVYNGHQLGGVTVHSKDRVKSAE
AIQLTYYLQSINSLNDMVAERWESSFCDTVRLFQKSNSKVKMYPYTSSSLREDFQKTS
RVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLGLLGLVTISLATLTAAGIINLTGG
KYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVYADSMLSFSLTTAM
YLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSI
FCRKVPKPEALQEKPAWYRFLLTARFSEDTAEGEEANTYESHLLVCFLKRYYCDWITN
TYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIEYTTAQQKYFSNYSPV
IGFYIYESIEYWNTSVQEDVLEYTKGFVRISRFESYLNYLRKLNVSTGLPKKNFTDML
RNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREELYDLLETLRRL
SVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVADSLINVWITL
TVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPMLSAFVLGKDFTRTKWV
KNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFAILPVI
LTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV"
BASE COUNT 703 a 661 c 587 g 731 t
ORIGIN
1 atctccatcc tgctcggcgc cagcttcagc cgctaccagg tcgaggagag cgtggagcac
61 ctgctggcgc cccagcacag cctggccaag atcgagcgca acctcgttaa cagcctcttc
121 ccggtcaacc gctccaagca ccgtctctac tcggacctgc agacccccgg gcgctacggc
181 cgggtcatcg tcacctcctt ccagaaagcc aacatgctgg accagcatca caccgacctg
241 atcttaaagt tgcatgctgc tgtcaccaag atccaggttc caaggcctgg ttttaattac
301 acgtttgccc atatatgtat cctgaataat gataagactt gcatcgtgga tgacatagtg
361 cacgtcctgg aagagctaaa gaatgctcgg gccaccaatc ggaccaattt tgctatcaca
421 tacccaatca cccacttaaa ggacgggagg gctgtgtaca atgggcacca gcttgggggc
481 gtcactgtgc acagcaaaga ccgggtgaaa tctgcagagg ccatccagct cacctactac
541 ctgcagtcaa tcaacagtct caatgacatg gtggctgaga ggtgggagtc cagcttctgc
601 gacactgtca gactgtttca gaaatccaac agcaaagtca aaatgtaccc ttacacgtcc
661 tcctcactga gggaagattt ccagaagacc agccgcgtat cagaacgtta cctggtcacc
721 agcctgattc tggtggttac catggccatc ctgtgctgct ctatgcagga ctgcgtccgc
781 agcaaaccct ggctaggcct gctcggattg gtgaccataa gcctggccac tctcactgca
841 gccgggatca tcaatcttac tggtgggaaa tataattcca ccttcctggg agtccctttc
901 gtcatgctag gtcatggatt atatgggact tttgaaatgt tatcctcctg gaggaaaact
961 agagaagacc aacatgttaa agagagaact gcagcagtct atgcagactc catgctctcc
1021 ttttctctca ccactgccat gtacctggtc acctttggca taggggccag ccctttcacg
1081 aacattgagg cagccaggat tttctgctgc aattcctgta ttgcaatctt cttcaactac
1141 ctctatgtac tctcgtttta tggttccagc ctagtgttca ctggctacat agaaaacaat
1201 taccagcata gtatcttctg tagaaaagtc ccaaagcctg aggcattgca ggagaagccg
1261 gcatggtaca ggtttctcct gacggccaga ttcagtgagg acacggctga aggcgaggaa
1321 gcgaacactt acgagagtca cctattggta tgtttcctca aacgctatta ctgtgactgg
1381 ataaccaaca cctatgtcaa gccttttgta gttctctttt accttattta tatttccttt
1441 gccttaatgg gctatctgca ggtcagtgaa gggtcagacc ttagtaacat tgtagcaacc
1501 gcgacacaaa ccattgagta cactactgcc cagcaaaagt acttcagcaa ctacagtcct
1561 gtgattgggt tttacatata tgagtctata gaatactgga acactagtgt ccaagaagat
1621 gttctagaat acaccaaggg gtttgtgcgg atatcccggt ttgagagcta tttaaattac
1681 cttcggaaac tcaatgtatc cactggcttg cctaagaaaa atttcacaga catgttgagg
1741 aattcctttc tgaaagcccc tcaattttca cattttcaag aggacatcat cttctctaaa
1801 aaatacaatg atgaggtcga tgtagtggcc tccagaatgt ttttggtggc caagaccatg
1861 gaaacaaaca gagaagaact ctatgatctc ttggaaaccc tgaggagact ttctgtcacc
1921 tccaaggtga agttcatcgt cttcaatccg tcctttgtat acatggatcg atatgcctcc
1981 tctctgggag cccccctgca caactcctgc atcagtgctt tgttcctgct cttcttctcg
2041 gcattcctgg tggcagattc actgattaac gtctggatca ctctcacagt tgtgtccgtg
2101 gagtttggag tgataggttt catgacatta tggaaagtag aactggactg catttctgtg
2161 ctatgcttaa tttatggaat taattacaca attgacaatt gtgctccaat gttatccgca
2221 tttgttctgg gcaaggattt cacaagaact aaatgggtaa aaaatgccct ggaagtgcat
2281 ggggtagcta ttttacagag ttacctctgc tatattgttg gtctgattcc tcttgcagct
2341 gtgccttcaa atctgacctg tacactgttc aggtgcttgt ttttaatagc atttgtcacc
2401 ttctttcact gctttgccat tttacctgtg atactgactt tcctgccacc ctctaagaaa
2461 aaaaggaaag agaagaaaaa tcctgagaac cgggaggaaa ttgagtgtgt agaaatggta
2521 gatatcgata gtacccgtgt ggttgaccaa attacaacag tgtgataatg tctgcttggc
2581 atattttcac cttaggtctt atcaagacca aagagattat gttaatgaaa caattaaatt
2641 caaagttctt ccctttttta aagataggaa acaggcattg cc
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