LOCUS AK054846 3105 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30284 fis, clone BRACE2002812, highly similar
to Homo sapiens RAB37, member RAS oncogene family (RAB37),
transcript variant 3, mRNA.
ACCESSION AK054846
VERSION AK054846.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3105)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3105
/clone="BRACE2002812"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000011460"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 408..917
/codon_start=1
/note="highly similar to Homo sapiens RAB37, member RAS
oncogene family (RAB37), transcript variant 3, mRNA"
/protein_id="BAG51433.1"
/translation="MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQ
GKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLL
YDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKVSGSGAGSAQPCTSSALAGPITT
QEQLSRHPS"
BASE COUNT 680 a 905 c 898 g 622 t
ORIGIN
1 aatgccctga gaacgcagcc gggtgctgag cctccggagt ccggtagctg aatgaaatac
61 gcagggatca ccagccggac ccaaatcttg cgtccctgcc agcatcctgg agtcctaaga
121 ggcagggatt ggagcggaca ggatctcaga actctggtcc cgggcgcaca acggcggagt
181 cgctgttcct ggtgctgaaa cgctcagtcc tggaagaacg tggccgcctg cccgcctggt
241 accgcgccgc ggccgctgcg gggaactgtc cagtgctgaa aacggatgcg gcccggcccg
301 cagagctcag acccaagcct gccgcaccca gcggagctcg aaccgagctc ctggaagcgc
361 tgacgcagag cgcagggaga gccggagcgg cgagctccaa gcctggcatg gacctgcaga
421 gacccgattc ctaccaggga ggagctggcc ctgacttcaa cgaccacgtc ctgcataaga
481 ccatcctggt gggtgacagt ggtgtgggaa agacgtctct gctggttcag ttcgatcagg
541 gcaagttcat ccccggctcc ttctcggcca ctgtgggcat cggattcacg aacaaggtgg
601 tgactgtgga tggcgtgaga gtgaagctgc agatctggga caccgctggg caggaacggt
661 tccgaagcgt cacccatgct tattacagag atgctcaggc cttgcttctg ctgtatgaca
721 tcaccaacaa atcttctttc gacaacatca gggcctggct cactgagatt catgagtatg
781 cccagaggga cgtggtgatc atgctgctag gcaacaaggt gagtggctcc ggggcagggt
841 cagcccagcc ctgcacttcc tcagccctag ccggccccat aaccacccaa gaacagttat
901 ctaggcatcc ttcctgaaaa ggactctgca gcctccagct caggggtcag acatatctgg
961 aggcttctgc ccatcccatc tgccccttcc agggaaagtc caagttgttg cctgagaaat
1021 caaggggtgc ccagttctca gcccccatta gagcagagtg aacagggtcc caggtcaggg
1081 gctaagagtg caaagggtta gccccaactg ctgtcctatt ccaagaccct ttaccaaagg
1141 tgagatccca gagctgggag ctacactggg cagaaaccct ggccccaggc caatcacacc
1201 tgcctgcagt cccttgggcc accagcagag ggcaggcaac gcctgcttct ggggcaaaat
1261 atgggcccgc tggggcggag gcctccttcc ccagagtgac ccatttgggc ttgacaggcg
1321 gatatgagca gcgaaagagt gatccgttcc gaagacggag agaccttggc cagggtaagt
1381 gattgtctgt gggacagggt gaagggtggg ggcaacccga cgctggccct gaggacactc
1441 tctcccgggc aggagtacgg tgttcccttc ctggagacca gcgccaagac tggcatgaat
1501 gtggagttag cctttctggc catcgccaag tgagagctgg gcagggaagg gaagtgtgcg
1561 gggcagggcg gcacactcca ggaatccagt agggcccggc ccctggccca gcccctggac
1621 acacctgcat tctgcaggct gaggtccatt tgctctggga gcactgggcc actgggagag
1681 gggagggggc ggctcagctc ctcaccccag cccagcccag cccagcccag cccattgtct
1741 cttcttcaag ggaactgaaa taccgggccg ggcatcaggc ggatgagccc agcttccaga
1801 tccgagacta tgtagagtcc cagaagaagc gctccagctg ctgctccttc atgtgaatcc
1861 cagggggcag agaggaggct ctggaggcac acaggatgca gccttccccc tcccaggcct
1921 ggcttattcc aagaggctga gccaatgggg agaaagatgg aggactcact gcacagccgc
1981 ttcctagcag ggagctatac tccaactcct acttgagttc ctgcggtctc cccgcatcca
2041 cagggagggt aaaacactta gcttttattt taatagtaca taatttaata ccaaaaaagg
2101 cgcctggatc cccaaaaaac cgaggctggg agctagtggc ccttttgctt tctaggactt
2161 ggggggccgg ccctccctcc taagcataac aaaggtggtg ttgctccagc tcagccccag
2221 gggacacaga tgcactttgg gggtgagggc aggtaatgac tccatcgcac cctcagttca
2281 gctggacaga ggctcaggtg accccagcct tcactgtctc ccgctctcca ggagcttatc
2341 ttcgccccat ctcccaaata agtgggccct tgtgctgtga ggaagaccaa agcctcaggg
2401 aagataagag atatggagat gggaggggga ggacaagggg cagagagtag ggtctagctg
2461 gctatctctg gccttactaa cacccccctg gaggcatgcc ccttttctcc agcacacaag
2521 cacattgggg cacctggaaa tattggttcc aggctcctgt tctctggact tcagatcctg
2581 ggggagcccc tcccccccct gaatccctgg cttagctacc ttcctgcctg tgcacctaaa
2641 aacctcaggt cagaactagg aaaagagttt tgtttttatt tttttgaaat ggagtctcgt
2701 tctgtcgccc aggctgaggt gcagtagtgc aatctccgct cactacaacc tccactccct
2761 ggggctcaag cgatcctccc acctcagccc ccgaagtagc tgggactata ggtgtgtacc
2821 atcacacctg gctaattttt gtattttttg tagacacagg gtttcgccat gttgcccagg
2881 ctggtcttga attcctgagc tcaagcaacc tgccggcctc ggcctcccaa agtactggga
2941 ttacacgcag aaggcaccat gcccaggcta gatgtgtctt atcccaatcc tttggcaggc
3001 atgcagctcc acaggcgatt tcttcaagca gctgaagtgt ttagccctcc tgggttaaga
3061 gccagataag gagaaatccc tttcctaggt ttggaatgtg ttgtg
//