LOCUS AK054669 2096 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30107 fis, clone BNGH41000198, weakly similar
to TETRACYCLINE RESISTANCE PROTEIN, CLASS E.
ACCESSION AK054669
VERSION AK054669.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2096)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2096
/cell_line="H4"
/cell_type="neuroglioma"
/clone="BNGH41000198"
/clone_lib="BNGH41"
/db_xref="H-InvDB:HIT000011283"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 97..1476
/codon_start=1
/protein_id="BAB70789.1"
/translation="MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTT
QYLWHRFSADLGYNGTRQRGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSST
LLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGL
LAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALAL
LIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFV
VITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWV
AEIGLAFNILGMVVFAFATITPLMFTGYGLLFLSLVITPVIRAKLSKLVRETEQGALF
SAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGMLEKADPHL
EFQQFPQSP"
BASE COUNT 390 a 676 c 582 g 448 t
ORIGIN
1 acagcgcaag ccccacgcca cgcgtcgctg gtcccaggca gcgagtcgct cgcgcgcccc
61 gccgcccgcc tggcgacagc tccgccgcgc acgcacatgg aggggagcgc gagccccccg
121 gaaaagcccc gcgcccgccc tgcggctgcc gtgctgtgcc ggggcccggt agagccgctg
181 gtcttcctgg ccaactttgc cttggtcctg cagggcccgc tcaccacgca gtatctgtgg
241 caccgcttca gcgccgacct cggctacaat ggcacccgcc aaaggggggg ctgcagcaac
301 cgcagcgcgg accccaccat gcaggaagtg gagaccctta cctcccactg gaccctctac
361 atgaacgtgg gcggcttcct ggtggggctc ttctcgtcca ccctgctggg agcttggagc
421 gacagtgtgg gccgccgccc gctgctagtg ctggcctcgc tgggcctgct gctccaggcc
481 ctagtgtccg tttttgtggt gcagctgcag ctccacgtcg gctacttcgt gctgggtcgc
541 atcctttgtg ccctcctcgg cgacttcggt ggccttctgg ctgctagctt tgcgtccgtg
601 gcagatgtca gctccagtcg cagccgcacc ttccggatgg ccctgctaga agccagcatc
661 ggggtggctg ggatgctggc aagcctcctc gggggccact ggctccgggc ccagggttat
721 gccaacccct tctggctggc cttggccttg ctgatagcca tgactctcta tgcagctttc
781 tgctttggtg agaccttaaa ggagccaaag tccacccggc tcttcacgtt ccgtcaccac
841 cgatccattg tccagctcta tgtggctccc gccccagaga agtccaggaa acatttagcc
901 ctctactcac tggccatctt cgtggtgatc actgtgcact ttggggccca ggacatctta
961 accctttatg aactaagcac acccctctgc tgggactcca aactaatcgg ctatggttct
1021 gcagctcagc atctccccta cctcaccagc ctgctggccc tgaagctcct gcagtactgc
1081 ctggccgatg cctgggtagc tgagatcggc ctggccttca acatcctggg gatggtggtc
1141 tttgcctttg ccactatcac gcctctcatg ttcacaggat atgggttgct tttcctgtca
1201 ttagtcatca cacctgtcat ccgggctaaa ctctccaagc tggtgagaga gacagagcag
1261 ggtgctctct tttctgctgt ggcctgtgtg aatagcctgg ccatgctgac ggcctccggc
1321 atcttcaact cactctaccc agccactctg aactttatga aggggttccc cttcctcctg
1381 ggagctggcc tcctgctcat cccggctgtt ctgattggga tgctggaaaa ggctgatcct
1441 cacctcgagt tccagcagtt tccccagagc ccctgatctg cctggaccag aagacagagg
1501 gcaagaggag caaagtgaac accaagcaac tggaggtctg cagctggaag cccagcccac
1561 agcaggacaa gcaactcttg tctaagggca gtgctctctt tggacgaggt agtcaagaga
1621 gaccaaggca ccaccccatc cacagctgac ccagcctctg tctaggatct agaatcataa
1681 cccacacagg cccactgcag gacaggtggc agaggagcta tttgggacag gagtcagttc
1741 tccctttctg ctatccatca cttataaccc cacaggccag aggagaggtc ctgagagagg
1801 tgacacttcg gggaccagag gcagcacgag ggctggcatc tctccttcca gcccaaactg
1861 cacagcccca accaggttcc caacacgtgt agcagtcatc agccattcct taacaatgaa
1921 tgtggtacct ggttagtgcc agccttggga aggagggagg gaggtaagag gggcttggtg
1981 atctctggag gaagagtgtt gcctttgctg tggttgggga atcgatcctt ggctatggcc
2041 tacccactcc cctggctgaa gagtgccaat cattacaaat cagcttcagc aaactg
//