LOCUS AK054668 2458 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30106 fis, clone BNGH41000190, weakly similar
to Rattus norvegicus schlafen-4 (SLFN-4) mRNA.
ACCESSION AK054668
VERSION AK054668.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2458)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2458
/cell_line="H4"
/cell_type="neuroglioma"
/clone="BNGH41000190"
/clone_lib="BNGH41"
/db_xref="H-InvDB:HIT000011282"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 113..>2458
/codon_start=1
/protein_id="BAB70788.1"
/translation="MSLRIDVDTNFPECVVDAGKVTLGTQQRQEMDPRLREKQNEIIL
RAVCALLNSGGGIIKAEIENKGYNYERHGVGLDVPPIFRSHLDKMQKENHFLIFVKSW
NTEAGVPLATLCSNLYHRERTSTDVMDSQEALAFLKCRTQTPTNINVSNSLGPQAAQG
SVQYEGNINVSAAALFDRKRLQYLEKLNLPESTHVEFVMFSTDVSHCVKDRLPKCVSA
FANTEGGYVFFGVHDETCQVIGCEKEKIDLTSLRASIDGCIKKLPVHHFCTQRPEIKY
VLNFLEVHDKGALRGYVCAIKVEKFCCAVFAKVPSSWQVKDNRVRQLPTREWTAWMME
ADPDLSRCPEMVLQLSLSSATPRSKPVCIHKNSECLKEQQKRYFPVFSDRVVYTPESL
YKELFSQHKGLRDLINTEMRPFSQGILIFSQSWAVDLGLQEKQGVICDALLISQNNTP
ILYTIFSKWDAGCKGYSMIVAYSLKQKLVNKGGYTGRLCITPLVCVLNSDRKAQSVYS
SYLQIYPESYNFMTPQHMEALLQSLVIVLLGFKSFLSEELGSEVLNLLTNKQYELLSK
NLRKTRELFVHGLPGSGKTILALRIMEKIRNVFHCEPANILYICENQPLKKLVSFSKK
NICQPVTRKTFMKNNFEHIQHIIIDDAQNFRTEDGDWYGKAKFITQTARDGPGVLWIF
LDYFQTYHLSCSGLPPPSDQYPREEINRVVRNAGPIANYLQQVMQEARQNPPPNLPPG
SLVMLYEPKWAQGVPGNLEIIEDLNLEEILIYVANKCRFLLR"
BASE COUNT 690 a 533 c 595 g 640 t
ORIGIN
1 ctctgctctg gacttgggag gctccgttgc ctgctcccgg agggagacgc gctgccgagg
61 agaacccagc gggagaacat ttcaggatag gaataggcca agtgctgaga agatgagtct
121 taggattgat gtggatacaa actttcctga gtgtgttgta gatgcaggaa aagtcaccct
181 tgggactcag cagaggcagg agatggaccc tcgcctgcgg gagaaacaga atgaaatcat
241 cctgcgagca gtatgtgctc tgctgaattc tggtgggggc ataatcaagg ctgagattga
301 gaacaaaggc tacaattatg aacgtcatgg agtaggattg gatgtgcctc caattttcag
361 aagccattta gataagatgc agaaggaaaa ccactttttg atttttgtga aatcatggaa
421 cacagaggct ggtgtgccac ttgctacctt atgctccaat ttgtaccaca gagagagaac
481 atccaccgat gtcatggatt ctcaggaagc tctggcattc ctcaaatgca ggactcagac
541 tccaacgaat attaatgttt ccaattcatt aggtccacag gcagctcagg gtagtgtaca
601 atatgaaggt aacataaatg tgtcagctgc tgctttattt gatagaaagc ggcttcagta
661 tctggaaaaa ctcaaccttc ctgagtccac acatgttgaa tttgtaatgt tctcgacaga
721 cgtgtcacac tgtgttaaag acagacttcc gaagtgtgtt tctgcatttg caaatactga
781 aggaggatat gtattttttg gtgtgcatga tgagacttgt caagtgattg gatgtgaaaa
841 agagaaaata gaccttacga gcttgagggc ttctattgat ggctgtatta agaagctacc
901 tgtccatcat ttctgcacac agaggcctga gataaaatat gtccttaact tccttgaagt
961 gcatgataag ggggccctcc gtggatatgt ctgtgcaatc aaggtggaga aattctgctg
1021 tgcggtgttt gccaaagtgc ctagttcctg gcaggtgaag gacaaccgtg tgagacaatt
1081 gcccacaaga gaatggactg cttggatgat ggaagctgac ccagaccttt ccaggtgtcc
1141 tgagatggtt ctccagttga gtttgtcatc tgccacgccc cgcagcaagc ctgtgtgcat
1201 tcataagaat tcggaatgtc tgaaagagca gcagaaacgc tactttccag tattttcaga
1261 cagagtggta tatactccag aaagcctcta caaggaactc ttctcacaac ataaaggact
1321 cagagactta ataaatacag aaatgcgccc tttctctcaa ggaatattga ttttttctca
1381 aagctgggct gtggatttag gtctgcaaga gaagcaggga gtcatctgtg atgctcttct
1441 aatttcccag aacaacaccc ctattctcta caccatcttc agcaagtggg atgcggggtg
1501 caagggctat tctatgatag ttgcctattc tttgaagcag aagctggtga acaaaggcgg
1561 ctacactggg aggttatgca tcaccccctt ggtctgtgtg ctgaattctg atagaaaagc
1621 acagagcgtt tacagttcgt atttacaaat ttaccctgaa tcctataact tcatgacccc
1681 ccagcacatg gaagccctgt tacagtccct cgtgatagtc ttgcttgggt tcaaatcctt
1741 cttaagtgaa gagctgggct ctgaggtttt gaacctactg acaaataaac agtatgagtt
1801 gctttcaaag aaccttcgca agaccagaga gttgtttgtt catggcttac ctggatcagg
1861 gaagactatc ttggctctta ggatcatgga gaagatcagg aatgtgtttc actgtgaacc
1921 ggctaacatt ctctacatct gtgaaaacca gcccctgaag aagttggtga gtttcagcaa
1981 gaaaaacatc tgccagccag tgacccggaa aaccttcatg aaaaacaact ttgaacacat
2041 ccagcacatt atcattgatg acgctcagaa tttccgtact gaagatgggg actggtatgg
2101 gaaagcaaag ttcatcactc agacagcaag ggatggccca ggagttctct ggatctttct
2161 ggactacttt cagacctatc acttgagttg cagtggcctc ccccctccct cagaccagta
2221 tccaagagaa gagatcaaca gagtggtccg caatgcaggt ccaatagcta attacctaca
2281 acaagtaatg caggaagccc gacaaaatcc tccacctaac ctcccccctg ggtccctggt
2341 gatgctctat gaacctaaat gggctcaagg tgtcccaggc aacttagaga ttattgaaga
2401 cttgaacttg gaggagatac tgatctatgt agcgaataaa tgccgttttc tcttgcgg
//