LOCUS AK054632 2560 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30070 fis, clone ASTRO2000046, highly similar
to CD166 ANTIGEN PRECURSOR.
ACCESSION AK054632
VERSION AK054632.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2560)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2560
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO2000046"
/clone_lib="ASTRO2"
/db_xref="H-InvDB:HIT000011246"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
CDS 650..2317
/codon_start=1
/protein_id="BAG51401.1"
/translation="MESKGASSCRLLFCLLISATVFRPGLGWYTVNSAYGDTIIIPCR
LDVPQNLMFGKWKYEKPDGSPVFIAFRSSTKKSVQYDDVPEYKDRLNLSENYTLSISN
ARISDEKRFVCMLVTEDNVFEAPTIVKVFKQPSKPEIVSKALFLETEQLKKLGDCISE
DSYPDGNITWYRNGKVLHPLEGAVVIIFKKEMDPVTQLYTMTSTLEYKTTKADIQMPF
TCSVTYYGPSGQKTIHSEQAVFDIYYPTEQVTIQVLPPKNAIKEGDNITLKCLGNGNP
PPEEFLFYLPGQPEGIRSSNTYTLMDVRRNATGDYKCSLIDKKSMIASTAITVHYLDL
SLNPSGEVTRQIGDALPVSCTISASRNATVVWMKDNIRLRSSPSFSSLHYQDAGNYVC
ETALQEVEGLKKRESLTLIVEGKPQIKMTKKTDPSGLSKTIICHVEGFPKPAIQWTIT
GSGSVINQTEESPYINGRYYSKIIISPEENVTLTCTAENQLERTVNSLNVSAISIPEH
DEADEISDENREKVNDQAKLIVGIVVGLLLAALVAGVVYWLYMKKSK"
BASE COUNT 747 a 592 c 620 g 601 t
ORIGIN
1 agtcctgcag cgcctctagg ctgcggatcc gcgcttcaac cacctgcttt gcgctgcgtc
61 cggggaagtg gggaggagac gggagggagg gaggaggcgg ggagaggagg aaagaggcag
121 cttacacacg ccttccagtc cctctactca gagcagcccg gagaccgctg ccgccgctgc
181 cgctgctacc accgctgcca cctgaggaga cccgccgccc ccccgtcgcc gcctcctgcg
241 agtccttctt agcacctggc gtttcatgca cattgccact gccattatta ttatcattcc
301 aatacaagga aaataaaaga agataccagc gaaaagaacc gcttacacct ttccgaatta
361 ctcaagtgtc tcctggaaac agagggtcgt tgtccccgga ggagcagccg aagggcccgt
421 gggctggtgt tgaccgggag ggaggaggag ttgggggcat tgcgtggtgg aaagttgcgt
481 gcggcagaga accgaaggtg cagcgccaca gcccagggga cggtgtgtct gggagaagac
541 gctgcccctg cgtcgggacc cgccagcgcg cgggcaccgc ggggcccggg acgacgcccc
601 ctcctgcggc gtggactccg tcagtggccc accaagaagg aggaggaata tggaatccaa
661 gggggccagt tcctgccgtc tgctcttctg cctcttgatc tccgccaccg tcttcaggcc
721 aggccttgga tggtatactg taaattcagc atatggagat accattatca taccttgccg
781 acttgacgta cctcagaatc tcatgtttgg caaatggaaa tatgaaaagc ccgatggctc
841 cccagtattt attgccttca gatcctctac aaagaaaagt gtgcagtacg acgatgtacc
901 agaatacaaa gacagattga acctctcaga aaactacact ttgtctatca gtaatgcaag
961 gatcagtgat gaaaagagat ttgtgtgcat gctagtaact gaggacaacg tgtttgaggc
1021 acctacaata gtcaaggtgt tcaagcaacc atctaaacct gaaattgtaa gcaaagcact
1081 gtttctcgaa acagagcagc taaaaaagtt gggtgactgc atttcagaag acagttatcc
1141 agatggcaat atcacatggt acaggaatgg aaaagtgcta catccccttg aaggagcggt
1201 ggtcataatt tttaaaaagg aaatggaccc agtgactcag ctctatacca tgacttccac
1261 cctggagtac aagacaacca aggctgacat acaaatgcca ttcacctgct cggtgacata
1321 ttatggacca tctggccaga aaacaattca ttctgaacag gcagtatttg atatttacta
1381 tcctacagag caggtgacaa tacaagtgct gccaccaaaa aatgccatca aagaagggga
1441 taacatcact cttaaatgct tagggaatgg caaccctccc ccagaggaat ttttgtttta
1501 cttaccagga cagcccgaag gaataagaag ctcaaatact tacacactga tggatgtgag
1561 gcgcaatgca acaggagact acaagtgttc cctgatagac aaaaaaagca tgattgcttc
1621 aacagccatc acagttcact atttggattt gtccttaaac ccaagtggag aagtgactag
1681 acagattggt gatgccctac ccgtgtcatg cacaatatct gctagcagga atgcaactgt
1741 ggtatggatg aaagataaca tcaggcttcg atctagcccg tcattttcta gtcttcatta
1801 tcaggatgct ggaaactatg tctgcgaaac tgctctgcag gaggttgaag gactaaagaa
1861 aagagagtca ttgactctca ttgtagaagg caaacctcaa ataaaaatga caaagaaaac
1921 tgatcccagt ggactatcta aaacaataat ctgccatgtg gaaggttttc caaagccagc
1981 cattcagtgg acaattactg gcagtggaag cgtcataaac caaacagagg aatctcctta
2041 tattaatggc aggtattata gtaaaattat catttcccct gaagagaatg ttacattaac
2101 ttgcacagca gaaaaccaac tggagagaac agtaaactcc ttgaatgtct ctgctataag
2161 tattccagaa cacgatgagg cagacgagat aagtgatgaa aacagagaaa aggtgaatga
2221 ccaggcaaaa ctaattgtgg gaatcgttgt tggtctcctc cttgctgccc ttgttgctgg
2281 tgtcgtctac tggctgtaca tgaagaagtc aaagtgagtt gtggaaaaaa gatcttcatc
2341 gttcattgac tttcactggg agaaaataca atgtgctaat tttgctcact ccagtcttgc
2401 atataattta tacaataagg aagatgtatc cccaaatcag gttgattata tattttgttt
2461 caactaattt tgactacact gcctttgtca gggacatggc ttgggatact gtttcacatg
2521 tgtccgttta tttgtctcaa tcaatagcct gaattcaatt
//