LOCUS AK054603 2315 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ30041 fis, clone 3NB692001528, highly similar
to DET1 homolog.
ACCESSION AK054603
VERSION AK054603.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2315)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2315
/cell_line="NB69"
/cell_type="neuroblastoma"
/clone="3NB692001528"
/clone_lib="3NB692"
/db_xref="H-InvDB:HIT000011217"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 162..1847
/codon_start=1
/note="highly similar to DET1 homolog"
/protein_id="BAG51398.1"
/translation="MVGQILKRDVIMDHHVSTIKPRRIQNQNVIHRLERRRISSGKAG
THWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLEIYEYQGCQ
AAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITNVAANGEHLNRECSLFTD
DCRCVIVGSAAYLPDEPHPPFFEVYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTR
TFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDL
LTVSAVFPEVQRDSQTGMANPFRDPFINSLKHRLLVYLWRRAEQDGSAMAKRRFFQYF
DQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPSQASFFVVYNMVTTEVIAVFEN
TSDELLELFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRRFKDTIINAKYGGHTE
AVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLL
KFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEYVVNFHMRHCCT"
BASE COUNT 554 a 581 c 554 g 626 t
ORIGIN
1 gtgcagccgc gggtgcagga gtcctggggc atggcggggg cggggcaggg ggaggcgcgc
61 acagaacagg ctggggcatc cctcgccctg gctctttgag cccggaccag acaggtgctg
121 ggaatacagc aaggaattag accagttccc tgctctctgg tatggtggga cagatactaa
181 aaagagatgt gataatggat catcatgttt ctaccatcaa gcctcgaaga atccaaaacc
241 aaaatgtcat tcaccgcttg gaacgccggc ggatcagttc aggcaaggca ggtacccact
301 ggcaccaagt ccgagtgttc catcagaatg tcttccccaa cttcacagtt gtcaacgttg
361 aaaagcctcc ttgtttcttg cgtaaattct cacctgatgg acgctacttt attgcttttt
421 cttcagacca gacatctctt gaaatctatg agtaccaggg ctgccaggca gcagaggacc
481 tactgcaggg atacgaagga gaaatcctgt ccaatggcaa tgaccagcgg tcagtgaata
541 tccggggccg gctctttgaa cgcttttttg tcctgctgca cattaccaat gttgcggcca
601 atggtgagca cctgaaccgg gagtgtagtc tcttcactga tgactgccgc tgtgtcatcg
661 tgggctcagc tgcctacctc ccagatgagc ctcaccctcc attttttgag gtatatcgga
721 acagtgaatc agtgaccccc aacccacggt cccctctaga agactattcc ctccatatca
781 ttgaccttca caccggccgc ttatgtgata cacgcacgtt caagtgtgac aaggtggtct
841 tgtcacacaa ccaagggctg tacttgtaca aaaacatcct ggccatcttg tctgtgcaac
901 aacagaccat ccatgtcttc caggtgactc ctgaaggcac tttcattgat gtgcggacca
961 ttggccgctt ttgctatgag gatgacctgc tcactgtgtc agctgttttc cctgaggtac
1021 agcgggacag tcagacaggc atggccaatc cctttaggga tcctttcatc aattccctca
1081 aacaccggtt gctggtatat ttgtggcgcc gggcagaaca ggatggtagt gcaatggcca
1141 agaggcgctt cttccagtat tttgaccaac tgcggcagct gcgaatgtgg aaaatgcagc
1201 ttctggatga aaaccacctg tttatcaagt acactagtga ggatgtagta acactgcgag
1261 tcacagatcc atcacaggca tctttctttg tggtgtacaa tatggtgacg acagaggtga
1321 ttgctgtgtt tgagaataca tcagatgagc ttttggagct ctttgagaac ttctgtgacc
1381 tttttcgtaa tgctaccctg cacagtgaag ttcagtttcc ctgctcagct tctagcaaca
1441 attttgcaag gcagatccag cgccggttca aagacactat tataaatgcc aagtatggag
1501 ggcacacaga ggcagtacgc cggctgctgg gtcagctccc catcagtgct cagtcttaca
1561 gcggtagccc ctatctggat ttgtctctct tcagttatga tgacaagtgg gtatctgtca
1621 tggagcggcc caagacttgt ggagatcacc caatcaggtt ctatgcccgg gactcgggcc
1681 tgctcaagtt tgagatccag gcggggttat tgggccgccc catcaaccac acagtgcgac
1741 gccttgttgc cttcaccttt cacccttttg agcctttcgc tatttctgtg cagaggacta
1801 atgctgagta tgttgtcaac ttccatatgc gacactgctg cacgtaggtg cctcaccaga
1861 gccagattat ctggtcttcc aagactttgc cactcactta tctcagtgga ctccaaagca
1921 aaagctcccg actactagct ctgttagttc cagcctgcta tacctcagat gggagagagc
1981 cagagagagg agtgagggtg gctcaaccta atggaatttt taaattgtat acaatactgc
2041 tactgattgt tataatatcc tcttgcgttt tccctgtggg aatgcccagc attaattaag
2101 tccatttcat ttttgcttta ctttgcattt gattgctgtg aagatgaaag cattagactt
2161 ttatcccctt catgtcactt cttcggcatt atggtttgca tctgaaagca gttaaatctt
2221 gtttactgat gagaatgaca tacatccttt ccatttagct cataagcacg gctatctttt
2281 taagagaaaa ataaagccat ggtattttca tactt
//