LOCUS       AK036789                3735 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930010H02 product:unclassifiable, full insert
            sequence.
ACCESSION   AK036789
VERSION     AK036789.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H.,
            Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I.,
            Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A.,
            Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M.,
            Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K.,
            Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A.,
            Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T.,
            Yasunishi,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=9930010H02
FEATURES             Location/Qualifiers
     source          1..3735
                     /clone="9930010H02"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:9930010H02"
                     /db_xref="MGI:2401242"
                     /db_xref="taxon:10090"
                     /dev_stage="adult"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /sex="female"
                     /strain="C57BL/6J"
                     /tissue_type="vagina"
     misc_feature    1..3735
                     /note="putative"
                     /note="unclassifiable"
BASE COUNT          920 a          863 c          850 g         1102 t
ORIGIN      
        1 acaggcagtc agaaacttca tgagaacaaa ccaaatccat gtcatgaact aaatactgat
       61 tgtctgaagt gtggcccact tgtgagtaat gtaagccata gactgttgga agggatcgtc
      121 taagcccatg tggtagcatc cttggtgccg cgctataggt tatgggcttt ttggatctag
      181 agtgggagtg tttgcttggt tataatgatg taaatactgc cttgtggagt tcaccttcta
      241 aaatcaacag caccctgcag accacgtgaa ctacccacag agaaacctat aaagactttc
      301 cacctttata atacgaggtg aaaaacagcc cagagaagct ggacagccta agaggaaaga
      361 tgtggaaggc tggaggtcta aaccacagtt tccaaatctt catcatgaaa gaaagttgca
      421 cagtcttgcc cagtgccata gggcttgtcc gcgtctggtg gaggagacca ccttctcctc
      481 tgctcattgg cactgggctt tatgcatgat ctgatttgtg ccattgcata tgagtggaag
      541 caataatctg tcctgaacga atcctgtaag aggcgctgtg agattgtgtc ctcagtgtcc
      601 gaggctgagt cccagcacta gtagggtatg gctagtgaga cctaagttgg aactaaaccg
      661 ttgttagttt tcatcattac tgtcctggat catgcaccga aactgactgg caggtagagg
      721 agagggcaga ggtatgaatg ccgtcaccac atgcagtggg gagtgaatcg atgctttcta
      781 tggttgatag gtgaatagtg ggtaccaggg ctgaccacaa gataaagtgc acccgcagca
      841 tggtgggacg acagagcggt ggtgggatgc taggatgaag tcagaacaag aagaaaggga
      901 ggttcgccaa gctgatttca tgtctcatag cagaaggcca ataaatggct ttgtctgtaa
      961 gggataaagc cagaaacagc tttacacatg ctcctcggag actagggaga tgaagaattg
     1021 gcatcatcgt ttttctcctg tcttctggct catcccagca gtgtatatac atgcagaaat
     1081 tgtgtctcat ccttcaaaga cagacttttg gttatagtct gccttgggct gtcttatagt
     1141 tctgtactct cttgtacagg aaactctctg aacctgtggc tgtctggatt tgtggtctcc
     1201 actatgtttt ccctctttct aaggtttttg catctgttac ccacctagct ggctctcata
     1261 ggactcactc ttctcctcta ggttgctgaa tccaggggcc aggtctgtgc gcctccttcc
     1321 tggacccacc agccttggac tccgtgctta ttgcctgctc cttgaaaggt tttcttcatt
     1381 tggcttcgtg ttcctttttc ccgtggatcc ttcattccct tagctcctct ctgcaacctc
     1441 tggatgtggg agttccccag ggcctccatc ctgactttga tcttctttct cctgcccaca
     1501 cttgctgcct tggctttaaa tcgcaactcc atgatgataa cttccaagct cagagcccta
     1561 gataagccct tgcttcaaac ttgagagtct cacatccaac ccagcacctc cctcccaaac
     1621 cacaaggaat cttagacttg gcctttgcag aaaccaatgc ctgctcttcc cccaaacctg
     1681 aatgtcccag gctggaacca gggctcatcc ttgccccatg ccccctctca cccatacctg
     1741 ctcctgacta ctttcaaact ctataccgga caacttctta ccatcctcta gcctaaacca
     1801 aactactgtg agagctgtgt gtgtgaacag tgtatgtttg tgtacacata tgtgtgtgtg
     1861 tgtgtgtgtg tgtgtgtgta ttatgtgggg gtgctttgta tgtgtatact ctctgtgtgt
     1921 gcacatatgt gtctattatg tggggatgct atgtgtgtat atagtctcta tgtgtgtaca
     1981 catacgtgtg tattatgtgg agatgttttg tgtgtgtgaa cagtgtgttg tttgtgtaca
     2041 catgtttgtg tgcattgtgt gggggtgctt tgtgtatgta tagtctctct gtgtgtgtat
     2101 attatgtggg aatgctgtgt gtgtgtatac agtgagcaca gcacgcatgt gggcattaga
     2161 gagccacaca ggcatcagtc cttaccttct actttaaaac aaggtctctg ttgctttttt
     2221 ctgctgcaca cacctgacta agtggactgc gaacttctga aattctctgt tctccacctc
     2281 tcatctgctc ataggagccc tgggttacag aagttcctgg gtgctccctc tgtgcccttg
     2341 gcttttccgt gagttctggg aatctgaatt caggtgcttg ctctcacagc aagcgttttt
     2401 gacccattaa cccatctctt cggcctgttg gattttgcaa aagggtctca ctctgtggtc
     2461 caggcagggt tcccgagcca cgacacttat ttttgacagc ttctttagaa catatttcct
     2521 tcattttatg tatatgggtg ccttacctgc atgtatgtct gtgtaccatg cttgcagtga
     2581 ctgcagaagc cagaagaggg cgttggctca cctgtgactg gagttacagg tggtcttgaa
     2641 ccactaagta gatgctggga tcaaaccaat gctcttaacc cctgaaccat ctttccagca
     2701 tttgatggct gcttaaatgg tcttctttcc ttcacagtaa gcccttacta gtgtctcttg
     2761 cagtctgttc tcaacatatc agctagattg attgtttgtg accaaattag atgactccac
     2821 tctggttttc aaactcccaa aacaaacaag cacacacaca cacacacaca cacacacaca
     2881 cacacactct taagccaaac taaccccctt cccaaataac tcccacagca ctcagtaaaa
     2941 tctcaagtct tgttataatt tgtacaaccc taggttagaa ttttcaatgg aacattataa
     3001 gaattttata ggtctttaac aatttctggc acctaaagta cacaaggtta ccaaaagaag
     3061 atacatctta acaatatatt tcatgtcata tatatacata tatattacta tcatttcaat
     3121 gtatatagac aacactaaat tatcagtgag actttagtgt ttcttttggt gtgtaagaag
     3181 ttttcaaaac ctgacaaaat ctagcatgtg ttttacacct gcagaatttc aaggtggttg
     3241 tgtaagctgt gctcatgttt ctttctgaga tatgacttgg aaactaactg tagccaaggg
     3301 cagatactgc caggaacatt tcagtgatga gtaggcaacc tgccaagcaa ggaagttgat
     3361 ttgctactgc ctttcaaaca gacctgtgct gtgcacctac tgtgtaacag ctttgctctt
     3421 tggagccaga atccaaagac agtagatgga taccagcact caggagctaa ttgtctcccc
     3481 aagaaggaag gtcaatagat cagattgggg tgtgtgctct cctgagggtg ggctgcaccc
     3541 taattgatag agtcagcttc ctgggaaact tggagacttg gaaaaggagc agcagaagac
     3601 tagtcaggag gatcatgagt ctgaagccag tctgggctgc ctagtgggag caatctcagg
     3661 tcaagtgagc agctcaccta gcctctctga gatagtctgc ctgcctggcc tccctactga
     3721 tcatcatgct ttgtt
//