LOCUS       AK032759                1803 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus 12 days embryo male wolffian duct includes
            surrounding region cDNA, RIKEN full-length enriched library,
            clone:6720429P16 product:CHEMOKINE-LIKE FACTOR 2 VARIANT 1 homolog
            [Mus musculus], full insert sequence.
ACCESSION   AK032759
VERSION     AK032759.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H.,
            Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I.,
            Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A.,
            Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M.,
            Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K.,
            Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A.,
            Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T.,
            Yasunishi,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=6720429P16
FEATURES             Location/Qualifiers
     source          1..1803
                     /clone="6720429P16"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:6720429P16"
                     /db_xref="MGI:2396400"
                     /db_xref="taxon:10090"
                     /dev_stage="12 days embryo"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /sex="male"
                     /strain="C57BL/6J"
                     /tissue_type="wolffian duct includes surrounding region"
     misc_feature    1..1803
                     /note="CHEMOKINE-LIKE FACTOR 2 VARIANT 1 homolog [Mus
                     musculus] (SPTR|Q923S5, evidence: FASTY, 98.8%ID,
                     94.1%length, match=243)"
                     /note="putative"
BASE COUNT          431 a          470 c          482 g          420 t
ORIGIN      
        1 gagttgagct ggtggcgcga gtcctggaaa gagccattaa tcgagaaggc ttgaaagaga
       61 ggcgtgactg ttgggtctgt gggcaagatg gagactccac ggccggtcgt aagccgtcgg
      121 cccttctgct gtactctgaa atgctttgtg aagttcctgc ggttggtggt aactgtgaca
      181 tctatgatct ttttcatcgt gggacaagcc cctgaaccat atatcgtcat cactgggttt
      241 gaagtcaccg ttattttctg tttcctagtc ttatacacgt gtggacttga caagataatg
      301 agatctttct tttggccttt gcttatctcc tttccatgtg agtgccggct agtttcatgt
      361 caacttgacc caagctagag aatggaaagg catcctgaga cacaggaatt caggaaccac
      421 atacctctac aaggagccac ctcagcagag gccgtccagc cccagggagg agatccccag
      481 ctgagcgcag gaccctcagc cactctcctt ctcttcatta cttttttcct tcatggctcc
      541 tccaaggaga gtgtcacacc aagaagaaaa tctcatgaaa gagatttatt gggaggccca
      601 tggtgtatag ctgtgaatcc agggatagct gccggagcgg gcagcacaga ttgggacaaa
      661 ggggcagtgc ttatatagga tttctgaggg ggcagagctt ctctggacag attcaagtca
      721 tgagcttggg gtactcaaga attgataggt tttcttgttc agagattggt agcatttttc
      781 acccccttcc ccctgcatct ggcccatggg ttagggtgga aagtccttcc tggcctgagc
      841 tggcttgcgc tgagatgaca tctctgtgga actgctgggg tcagagggta ctagagaagt
      901 ggtgctgccc ccaaagacgg cttttgaggg acaactttgg ctgaggcaag agaggaaatg
      961 ggccaccata gacagctcct gggttggccc cacactgagg agatgtagta gtgcctcatt
     1021 ttaaccccag gcacatttgg acatctcttg tggggtgttt tactgcagtg gtcgtagact
     1081 gggatgtgga atggcctctg ctttcatgga ttttgcacca tgccctatag acactataca
     1141 tacccccaaa taaccccaga accccttttc tctgggttgg ctggcagcag ctcctgtgca
     1201 tgtggttgct gggtcttgag ttttcaagct aggcatggcg ccattttccc acaacgagga
     1261 cagcagattg ctaggctagg cagcagccat caaaaaacag gtgcacgcgg gatagactgc
     1321 cagcagccgt tgaagacagt ttcccagggg gccatcgccc tgcggccacc cagccaaccg
     1381 gaggtgcagg gccagcctga cataatgagg cttggaaccc accatgaatc ctgcatccgc
     1441 caggcgtgag tccagcgggg atgggtccag gcgtgagtcc agacgctcaa ctttacgacc
     1501 tcgagtgttg gatgcttcct caccttcgga ttcacaggcg tatgctgcct ctgctccacc
     1561 tcaccaggga ccttcagtac ccgggacacc aaccagccag ggaccttcag tacccgggac
     1621 accaaccagc cagggacctt cagtacccgg gacaccagcc agccagggac cttcagtacc
     1681 cggaacacta accagtcagt gaccttgagt agggaccatg ccatctagta agttcatgca
     1741 gtcgctgcac agagatcaca ttgccaacaa attacaaaaa aaaaaaccaa acaacaaaca
     1801 agc
//