LOCUS       AK030889                3829 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830444G22 product:SIMILAR TO
            ADP-RIBOSYLTRANSFERASE (NAD+, POLY (ADP-RIBOSE) POLYMERASE) [Mus
            musculus], full insert sequence.
ACCESSION   AK030889
VERSION     AK030889.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3829)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H.,
            Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I.,
            Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A.,
            Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M.,
            Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K.,
            Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A.,
            Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T.,
            Yasunishi,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=5830444G22
FEATURES             Location/Qualifiers
     source          1..3829
                     /clone="5830444G22"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:5830444G22"
                     /db_xref="MGI:2394058"
                     /db_xref="taxon:10090"
                     /dev_stage="adult"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /sex="male"
                     /strain="C57BL/6J"
                     /tissue_type="thymus"
     CDS             63..3107
                     /codon_start=1
                     /note="SIMILAR TO ADP-RIBOSYLTRANSFERASE (NAD+, POLY
                     (ADP-RIBOSE) POLYMERASE) [Mus musculus] (SPTR|Q921K2,
                     evidence: FASTY, 100%ID, 100%length, match=3042)"
                     /note="putative"
                     /protein_id="BAC27173.1"
                     /transl_table=1
                     /translation="MAEASERLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMF
                     DGKVPHWYHFSCFWKVGHSIRQPDVEVDGFSELRWDDQQKVKKTAEAGGVAGKGQDGS
                     GGKAEKTLGDFLAEYAKSNRSMCKGCLEKIEKGQMRLSKKMVDPEKPQLGMIDRWYHP
                     TCFVKKRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAIKNEGKRKGDEVDGTDE
                     VAKKKSKKGKDKDSSKLEKALKAQNELIWNIKDELKKACSTNDLKELLIFNQQQVPSG
                     ESAILDRVADGMAFGALLPCKECSGQLVFKSDAYYCTGDVTAWTKCMVKTQNPSRKEW
                     VTPKEFREISYLKKLKVKKQDRIFPPESSAPAPLALPLSVTSAPTAVNSSAPADKPLS
                     NMKILTLGKLSQNKDEAKAVIEKLGGKLTGSANKASLCISTKKEVEKMSKKMEEVKAA
                     NVRVVCEDFLQDVSASTKSLQELLSAHSLSSWGAEVKAEPGEVVAPKGKSAAPSKKSK
                     GAVKEEGVNKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGT
                     NSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSNKLEQMPSKEDAVEHFMKLYEEKTGN
                     AWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVKPGTKSKLPKPVQELVGMIFDVESM
                     KKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAVSQGSSESQILDLSNRFYTLI
                     PHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLK
                     TDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHN
                     RRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGD
                     PIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASITLEGVEVPLG
                     TGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLW"
     regulatory      3808..3813
                     /note="putative"
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      3829
                     /note="putative"
BASE COUNT         1025 a          930 c         1081 g          793 t
ORIGIN      
        1 ggacacgtta gcggagcgca ccagcggcgg cgtcgggctg ccgctgcagc acgagaagga
       61 ggatggcgga ggcctcggag aggctttatc gagtggagta cgcgaagagc gggcgcgcct
      121 cttgcaagaa atgcagcgag agtattccca aggactccct ccgcatggcc atcatggtgc
      181 agtcacccat gttcgatggg aaagtcccac actggtacca cttctcctgc ttctggaagg
      241 tgggccactc catccggcag cctgatgttg aggtggatgg cttctctgag ctgcgctggg
      301 atgatcagca gaaggtcaag aagacggccg aggctggagg cgtggcaggc aaaggccagg
      361 atggaagtgg cggcaaggcg gagaagacat tgggtgactt tttagcggag tacgccaagt
      421 ccaacaggag catgtgcaag ggctgcctgg agaagataga gaagggccag atgcgcctgt
      481 ccaagaagat ggtggatcca gagaagccac agctgggtat gattgaccgc tggtaccatc
      541 caacttgctt tgtcaagaag cgggacgagc tgggcttccg gcctgagtac agtgccagtc
      601 agctcaaggg ctttagcctc ctctctgcag aagacaaaga agctctgaag aagcagctcc
      661 cggccatcaa gaatgaagga aagagaaaag gtgacgaggt ggatggaaca gatgaagtgg
      721 ccaaaaagaa atctaagaaa gggaaggaca aggatagtag taagctggag aaggccctca
      781 aggctcagaa tgagctgatc tggaatatca aagacgagct gaagaaagcg tgttccacca
      841 acgacctgaa ggagctgctc atcttcaacc agcagcaggt gccgtcagga gagtcagcga
      901 tcttggacag agttgctgac ggcatggcgt ttggggccct tctgccctgc aaggagtgtt
      961 caggccagct ggtctttaag agcgacgctt attactgtac tggggatgtc actgcctgga
     1021 ccaagtgcat ggtcaagaca cagaatccta gccgaaagga atgggtaact ccaaaggaat
     1081 tccgagaaat atcctacctc aagaagttaa aggtcaaaaa acaggaccga atattccctc
     1141 cagaaagcag cgccccagca ccactggcac tgcccctctc tgtcacctca gcacccacag
     1201 ctgtgaactc ctctgctcca gcagacaagc ccctgtctaa catgaagatc ctgactcttg
     1261 ggaagctctc ccagaacaag gacgaagcaa aagctgtgat tgagaaactc ggaggcaagt
     1321 tgacaggatc tgccaacaag gcctccttgt gtatcagcac taaaaaggag gtggagaaga
     1381 tgagtaagaa gatggaggaa gtgaaagcag ccaacgttcg agttgtgtgt gaggacttcc
     1441 tccaggacgt gtctgcctcc actaaaagcc tccaagagct gctctcggcc cacagcttgt
     1501 cctcgtgggg ggctgaggtg aaggcagagc ctggtgaagt ggtggccccc aaggggaagt
     1561 cagctgcacc ctccaagaag agcaagggtg ctgtcaagga ggaaggtgtc aacaaatctg
     1621 aaaagaggat gaaattaact ctgaagggag gagcagccgt tgatcctgac tctggtctgg
     1681 aacactctgc acacgtcctg gagaaaggtg ggaaggtgtt cagcgccaca cttggcctgg
     1741 tggacattgt gaaagggacg aactcctatt acaaactgca gcttctggag gacgacaagg
     1801 agagcaggta ctggatcttc cggtcctggg gccgggtggg cacagttatc ggcagtaaca
     1861 aacttgagca gatgccctcc aaagaggacg ctgttgagca cttcatgaag ctgtatgaag
     1921 agaagactgg gaatgcctgg cactcgaaaa acttcacaaa gtatcccaag aagttctacc
     1981 ctctggagat tgactatggc caggacgaag aggcagtaaa gaagctgacg gtgaagcctg
     2041 gcaccaagtc gaagctgccg aagccagtgc aggagctcgt ggggatgatc ttcgacgtgg
     2101 agagcatgaa aaaggccttg gtggagtacg agattgacct ccagaagatg cccttgggga
     2161 agctgagcag aaggcagatc caggccgcct actctatcct cagcgaggtc cagcaggcag
     2221 tgtctcaagg cagcagtgaa tcccagatcc tagatctctc caatcgcttc tacactctga
     2281 tcccccatga ctttggaatg aagaagcccc cactcctgaa caacgcagac agcgtgcagg
     2341 ccaaggtgga gatgctagac aacctcctgg acatcgaggt ggcctatagt cttctcaggg
     2401 gtggctctga cgacagcagc aaggatccca tcgacgtcaa ctacgagaaa ctcaaaactg
     2461 acattaaggt ggttgacaga gattctgaag aggccgaggt catcaggaag tacgtgaaga
     2521 acactcatgc taccacgcac aacgcctatg acctggaagt gatcgatatc ttcaagatag
     2581 agcgcgaggg ggagagccag cgctacaagc ccttcaggca gcttcacaac cggaggctgc
     2641 tgtggcacgg ctccaggacc accaactttg ctggcatcct gtcgcagggt ctgcggatag
     2701 ccccacctga agcgcctgtg acaggctaca tgtttgggaa agggatctac tttgccgaca
     2761 tggtgtccaa aagtgcaaac tactgccaca catctcaggg agacccgatt ggcttaatac
     2821 tgctgggaga ggttgccctt ggaaacatgt atgaactcaa gcatgcttca catatcagca
     2881 agttacccaa gggcaagcac agtgtcaaag gtttgggaaa aaccacccct gacccttcgg
     2941 ccagcatcac cctggagggt gtagaggttc cactgggaac agggatccca tctggtgtca
     3001 acgacacctg cctgctgtat aatgagtaca ttgtctacga cattgctcag gtgaatctca
     3061 aatacctgct gaaactcaag ttcaatttta agacatccct gtggtaaagt gcgaggggtg
     3121 ggctgtgccc agcacccagg gcctaggggg caattctccc tagtgcctct gcaccagaca
     3181 ccacaaaacc tcagccatgc tgccgccgaa gggtggcccc ctcaccgaat ctccttagga
     3241 agggttttat acagacaggt taaagggctc tggtttcaag tcccttgtcc atgctgcact
     3301 ggggcaggcc ggttgtttgt ggtttgtcct accagccaca gctccataga cagcagctgg
     3361 cagtagagca aaagttgggg agaggatttt gttgtttgcc tagactagtc ctgagggaag
     3421 aaacaccacg tcacagtcac gatgtctgcc ttactggctt ccccagggaa ggaaaaatgt
     3481 gcttcctccc tttttttcaa gggttcatct ttgctttaat tttggcaaaa tgttaagcat
     3541 ttattttgag ctaaaaataa aagttaattt catactatat agattttctt ttttatcttg
     3601 tatgtccccc tcttagtctg ctgagctttt gttttgcttg gttttcagtg atagacatgg
     3661 gatagccaaa agaagggact acctgaaacc cctaactggg gcgactgagc ctgtagtgtg
     3721 gtcagttcaa agttgcattt gggattctat gtcttccaaa ttgaaccgtc tgaatcagta
     3781 cagccaccca aagggctata gttctcaatt aaaatgcaaa tggatatct
//