LOCUS AK028042 3591 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200004M19 product:ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) 1, full insert sequence. ACCESSION AK028042 VERSION AK028042.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3591) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H., Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M., Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T., Yasunishi,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=1200004M19 FEATURES Location/Qualifiers source 1..3591 /clone="1200004M19" /clone_lib="RIKEN full-length enriched mouse cDNA library" /db_xref="FANTOM_DB:1200004M19" /db_xref="MGI:2389811" /db_xref="taxon:10090" /dev_stage="adult" /mol_type="mRNA" /organism="Mus musculus" /sex="male" /strain="C57BL/6J" /tissue_type="lung" misc_feature 1..3591 /note="ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) 1 (MGD|MGI:1340806 GB|NM_007415, evidence: BLASTN, 96%, match=3128)" /note="putative" BASE COUNT 962 a 885 c 1030 g 714 t ORIGIN 1 acgcttgagg gggaaaccga cacgttagcg gagcgaccag cggcggcgtc gggctgccgc 61 tgcacacgag aaggaggatg gcggaggcct cggagagctc ttatcgagtg gagtacgcga 121 agagcgggcg cgcctcttgc aagaaatgca gcgagagtat tcccaaggac tccctccgca 181 tggccatcat ggtgcagtca cccatgttcg atgggaaagt cccacactgg taccacttct 241 cctgcttctg gaaggtgggc cactccatcc ggcagcctga tgttgaggtg gatggcttct 301 ctgagctgcg ctgggatgat cagcagaagg tcaagaagac ggccgaggct ggaggcgtgg 361 caggcaaagg ccaggatgga agtggcggca aggcggagaa gacattgggt gactttttag 421 cggagtacgc caagtccaac aggagcatgt gcaagggctg cctggagaag atagagaagg 481 gccagatgcg cctgtccaag aagatggtgg atccagagaa gccacagctg ggtatgattg 541 accgctggta ccatccaact tgctttgtca agaagcggga cgagctgggc ttccggcctg 601 agtacagtgc cagtcagctc aagggcttta gcctcctctc tgcagaagac aaagaagctc 661 tgaagaagca gctcccggcc atcaagaatg aaggaaagag aaaaggtgac gaggtggatg 721 aaccagatga agtggcccaa caagaaatct aagaaaggga aggacaagga tagtagtaag 781 ctggagaagg ccctcaaggc tcagaatgag ctgatctgga atatcaaaga cgagctgaag 841 aaagcgtgtt ccaccaacga cctgaaggag ctgctcatct tcaaccatca ccaggtgccg 901 tcaggagagt cagcgatctt ggacagagtt gctgacggca tggcgtttgg ggcccttctg 961 ccctgcaagg agtgttcagg ccagctggtc tttaagagcg acgcttatta ctgtactggg 1021 gatgtcactg gctggaccaa gtgcatggtc aagacacaga atcctagccg gaaggaatgg 1081 gtaactccaa aggaattccg agaaatatcc tacctcaaga agttaaaggt caaaaaacag 1141 gaccgaatat tccctccaga aagcagcgcc ccagcaccac tggcactgcc cctctctgtc 1201 acctcagcac ccacagctgt gaactcctct gctccagcag acaagcccct gtctaacatg 1261 aagatcctga ctcttgggaa gctctcccag aacaaggacg aagcaaaagc tgtgattgag 1321 aaactcggag gcaagttgac aggatctgcc aacaaggcct ccttgtgtat cagcactaaa 1381 aaggaggtgg agaagatgag taagaagatg gaggaagtga aagcggccaa cgttcgagtt 1441 gtgtgtgagg acttcctcca ggacgtgtct gcctccacta aaagcctcca agagctgctc 1501 tcggcccaca gcttgtcctc gtggggggct gaggtgaagg cagagcctgg tgaagtggtg 1561 gcccccaagg ggaagtcagc tgcaccctcc aagaagagca agggtgctgt caaggaggaa 1621 ggtgtcaaca aatctgaaaa gaggatgaaa ttaactctga agggaggagc agccgttgat 1681 cctgactctg gtctggaaca ctctgcacac gtcctggaga aaggtgggaa ggtgttcagc 1741 gccacacttg gcctggtgga cattgtgaaa gggacgaact cctattacaa actgcagctt 1801 ctggaggacg acaaggagag caggtactgg atcttccggt cctggggccg ggtgggcaca 1861 gttatcggca gtaacaaact tgagcagatg ccctccaaag aggacgctgt tgagcacttc 1921 atgaagctgt atgaagagaa gactgggaat gcctggcact cgaaaaactt cacaaagtat 1981 cccaagaagt tctaccctct ggagattgac tatggccagg acgaagaggc agtaaagaag 2041 ctgacggtga agcctggcac caagtcgaag ctgccgaagc cagtgcagga gctcgtgggg 2101 ataatcttcg acgtggagag catgaaaaag gccttggtgg agtacgagat tgacctccag 2161 aagatgccct tggggaagct gagcagaagg cagatccagg ccgcctactc tatcctcagc 2221 gaggtccagc aggcagtgtc tcaaggcagc agtgaatccc agatcctaga tctctccaat 2281 cgcttctaca ctctgatccc ccatgacttt ggaatgaaga agcccccact cctgaacaac 2341 gcagacagcg tgcaggccaa ggtggagatg ctagacaacc tcctggacat cgaggtggcc 2401 tatagtcttc tcaggggtgg ctctgacgac agcagcaagg atcccatcga cgtcaactac 2461 gagaaactca aaactgacat taaggtggtt gacagagatt ctgaagaggc cgaggtcatc 2521 aggaagtacg tgaagaacac tcatgctacc acgcacaacg cctatgacct ggaagtgatc 2581 gatatcttca agatagagcg cgagggggag agccagcgct acaagcccct tcaggcagct 2641 tcacaaccgg aggctgctgt ggcacggctc cagcaccacc aactttgctg gcatcctgtc 2701 gcacggtctg cggatagccc acctgaagcg cctgtgacag gctacatgtt tgggaaaggg 2761 atctactttg ccgacatggt gtccaaaagt gcaaactact gccacacatc tcagggagac 2821 ccgattggct taatactgct gggagaggtt gcccttggaa acatgtatga actcaagcat 2881 gcttcacata tcagcaagtt acccaagggc aagcacagtg tcaaaggttt ggggaaaaac 2941 cacccctgac ccttcggcca gcatcaccct ggagggtgta gaggttccac tgggaacagg 3001 gatcccatct ggtgtcaacg acacctgcct gctgtataat gagtacattg tgtacgacat 3061 tgctcaggtg aatctcaaat acctgctgaa actcaagttc aattttaaga catccctgtg 3121 gtaaagtgcg aggggtgggt gtgcccagca cccagggcct agggggcaat tctccctagt 3181 gcctctgcac cagacaccac aaaacctcag ccatgctgcc gccgaagggt ggccccctca 3241 ccgaatctcc ttaggaaggg ttttatacag acaggttaaa gggctctggt ttcaagtccc 3301 ttgtccatgc tgcactgggg caggccggtt gtttgtggtt tgtcctacca gccacagctc 3361 catagacagc agctggcagt agagcaaaag ttggggagag gattttgttg tttgcctaga 3421 ctagtcctga gggaagaaac accacgttac agtcacgatg tctgccttac tggcttcccc 3481 agggaaggaa aaatgtgctt cctccctttt ttcaagggtt catctttgct ttaattttgg 3541 caaaatgtta agcatttatt ttgagcttaa aataaaagtt aatttcatat t //