LOCUS AK027890 2540 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ14984 fis, clone Y79AA1000349, highly similar
to M.musculus Spnr mRNA for RNA binding protein.
ACCESSION AK027890
VERSION AK027890.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2540)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction,
5'- & 3'-end one pass sequencing and clone selection: Helix
Research Institute (supported by Japan Key Technology Center etc.)
and Department of Virology, Institute of Medical Science,
University of Tokyo.
FEATURES Location/Qualifiers
source 1..2540
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="Y79AA1000349"
/clone_lib="Y79AA1"
/db_xref="H-InvDB:HIT000011162"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 348..2366
/codon_start=1
/protein_id="BAB55434.1"
/translation="MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKH
VSDWLDETNKGTKTEGETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMD
LELVLMCKDKPTETLLNTVKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTL
KVILTSPLIRDELEKKDGENVSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSC
VIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGIL
LPGGPGLHDPCERDPTDALSYMTIQQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSS
KPFQKYSWSVTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRNLRKILDSKAIDLMNAL
MRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQA
MGYPTGFDADIECMSSDEKSDNESKNETVSSNSSNNTGNSTTETSSTLEVRTQGPILT
ASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASA
ALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAVSAAVQAVRGRGRGTLTRGAFVGAT
AAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMKFPTYPVPHYSFF"
BASE COUNT 790 a 519 c 637 g 594 t
ORIGIN
1 gtcacgtgct cgctgccgcc gctgccgccg ccgaagcgga gaccggagcc gcgagcgcca
61 ccagggcagc agccgccgca gccgccgccg ctgggcagag gagccggaga cgcgagcggg
121 cgaggtggcg gcggcggcgg agcgggagcg ggtaccgggc gcgggcagag cgcggcggcg
181 cgggtgtgtt ccagagaaca agccttcaga catttgctat attgacgctg agctgtcagg
241 ggactcaggc ttatgaggag gtattgttac acaaaacagt gtctagtgaa gacgacaaga
301 aagaggggaa aggatcggaa aaagaagcta aaatactata gaaaaccatg agatctattc
361 gatcttttgc taatgatgat cgccatgtta tggtgaaaca ttcaacaatc tatccatctc
421 cggaggaact tgaagctgtt cagaatatgg tatctactgt tgaatgtgct cttaaacatg
481 tctcagattg gttggatgaa acaaataaag gcacaaaaac agagggtgag acagaagtga
541 agaaagatga ggccggagaa aactattcca aggatcaagg tggtcggaca ttgtgtggtg
601 taatgaggat tggcctggtt gcaaaaggct tgctgattaa agatgatatg gacttggagc
661 tggttttaat gtgcaaagac aaacccacag agaccctgtt aaatacagtc aaagataatc
721 ttcctattca gattcagaaa ctcacagaag agaaatatca agtggaacaa tgtgtaaatg
781 aggcatctat tataattcgg aatacaaaag agcccacgct aactttgaag gtgatactta
841 cctcacctct aattagggac gaattggaga agaaggatgg agaaaatgtt tcgatgaaag
901 atcctccgga cttattggac aggcagaaat gcctgaacgc cttggcgtct cttcgacatg
961 ccaaatggtt tcaggcaagg gcaaatggat taaagtcatg tgtaattgtc ctccgcattc
1021 tgcgtgattt gtgcaacaga gtccccacat gggcaccatt gaaaggatgg ccactagaac
1081 ttatatgtga aaagtctata ggtacttgta atagaccttt gggcgctggg gaggccttga
1141 gacgagtaat ggagtgtttg gcatctggaa tactacttcc tgggggtcct ggtcttcatg
1201 atccttgtga gcgagaccca acagatgctc tgagctatat gaccatccag caaaaagaag
1261 atattaccca cagtgcacag catgcactca gactatcagc ctttggccag atttacaaag
1321 tgctggagat ggaccccctt ccatctagta agccttttca gaagtattcc tggtcagtta
1381 ctgataaaga aggtgctggg tcttcagctc taaagaggcc atttgaagat ggattagggg
1441 atgataaaga ccccaacaag aagatgaaac gaaacttaag gaaaattctg gatagtaaag
1501 caatagacct tatgaatgca ctaatgaggc taaatcagat caggcctggg cttcagtata
1561 agctcctatc tcagtctggc cccgttcatg ccccagtctt cacaatgtct gtagatgtgg
1621 atggcacaac atatgaagcc tcaggaccat ccaagaaaac agcaaaactt cacgtagcgg
1681 tgaaggtatt gcaggcaatg ggatatccaa caggctttga tgcagatatt gaatgtatga
1741 gttccgatga aaaatcagat aatgaaagta aaaatgaaac agtgtcttca aactcaagca
1801 ataatactgg aaattctaca actgaaacct ccagtacctt agaggtaaga actcagggcc
1861 ctatcctcac agcaagtggc aaaaaccctg taatggagct caatgaaaaa agaagaggtc
1921 tcaagtatga actcatctca gagactggtg gaagccatga caagcgcttt gtaatggagg
1981 tagaagtaga tggacagaaa ttcagaggcg caggtccaaa taagaaagtg gcaaaggcga
2041 gtgcagcttt agctgccttg gagaaactgt tttctggacc caatgcggca aataataaga
2101 aaaagaagat tatccctcag gcaaagggcg ttgtgaatac agctgtgtct gcagcagtcc
2161 aagctgttcg gggcagagga agaggaactc taacaagggg agcttttgtt ggggcgacag
2221 ctgctcctgg ctacatagct ccaggctatg gaacaccata tggttacagc acagctgccc
2281 ctgcctatgg tttacccaag agaatggttc tgttacccgt tatgaaattt ccaacatatc
2341 ctgttcccca ctactcattc ttttagcaaa tgacagaagc taattcctat tgaacaacaa
2401 tacagtacaa cacagaatgt tagagaaaaa gcctttttat cctgctttct ttgaacacat
2461 acttgatcaa aattatttgt aaagaacatc tttcctactt tttgatttta acaaatgcaa
2521 atttagttct ctaaaacttg
//