LOCUS AK027710 3024 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ14804 fis, clone NT2RP4001638, weakly similar
to DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19.
ACCESSION AK027710
VERSION AK027710.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3024)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction,
5'- & 3'-end one pass sequencing and clone selection: Helix
Research Institute (supported by Japan Key Technology Center etc.)
and Department of Virology, Institute of Medical Science,
University of Tokyo.
FEATURES Location/Qualifiers
source 1..3024
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4001638"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000010982"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 334..2658
/codon_start=1
/protein_id="BAB55315.1"
/translation="MRTREEELKSLGADFTFGFIQVMDGEKDPRNLLVAFRIVHDLIS
RDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLL
PLLIEKVDSEVLSAKLDSLQTLNACCAVYGQKELKDFLPSLWASIRRESSQRRTILEM
LLGFLKLQQKWSYEDKDQRPLNGFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQP
DLLSYEDLELAVGHLYRLSFLKEDSQSCRVAALEASGTLAALYPVAFSSHLVPKLAEE
LRVGESNLTNGDEPTQCSRHLCCLQALSAVSTHPSIVKETLPLLLQHLWQVNRGNMVA
QSSDVIAVCQSLRQMAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKGPSVLRKVL
LEDEVLAAMVSVIGTATTHLSPELAAQSVTHIVPLFLDGNVSFLPENSFPSRFQPFQD
GSSGQRRLIALLMAFVCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGL
LNKHPAGQQLDEFLQLAVDKVEAGLDSGPCRSQAFTLLLWVTKALVLRYHPLSSCLTA
RLMGLLSDPELGPAAADGFSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGF
HAAPQDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDCVVQLSTLSCLQ
PLLLEAPQVMSLHVDTLVTKFLNLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQV
IRALAKPLDDKKRLVRKEAVSARGEWFLLGSPGS"
BASE COUNT 650 a 838 c 780 g 756 t
ORIGIN
1 caagttgtgg aagcccttgg gtcctctcta gagaatccag aaccccgaac tcgggcacga
61 ggaatccagc ttttgtcaca ggtgctactc cactgtcaca ccttgctcct ggagaaggaa
121 gtggtacacc tgatactgtt ctatgagaac cggctgaagg accatcatct tgtgatccca
181 tctgtcctgc agggtttgaa ggcacttagc ctgtgtgtgg ccctgccccc agggctggct
241 gtttctgtgc ttaaagccat cttccaggaa gtgcatgtac agtccctgcc acaggtggac
301 cgacacacag tctacaatat catcaccaat tttatgcgaa cccgggaaga agagctaaag
361 agcctaggag ctgacttcac ctttggcttc atccaggtga tggatgggga aaaggatccc
421 cgtaatcttc tggtggcctt ccgcatcgtc catgacctca tctccaggga ctatagcctg
481 ggaccctttg tggaggagtt gtttgaagtg acatcctgtt atttccctat cgattttacc
541 cctccaccta atgatcccca tggtatccag agagaagacc tcatcctgag tcttcgcgct
601 gtgctggctt ctacaccacg atttgctgag tttctgctgc ccctgttgat tgagaaagtg
661 gattctgagg ttctgagtgc caagttggat tctctacaga ctctgaatgc ttgctgtgct
721 gtgtatggac agaaggaact gaaggacttc ctccccagcc tttgggcttc tatccgcaga
781 gagagcagcc agcggcggac aatccttgaa atgctcctgg gtttcttgaa gctgcagcag
841 aaatggagct atgaagacaa agatcaaagg cctctgaatg gcttcaagga ccagctgtgc
901 tcactggtat tcatggctct aacagacccc agcacccagc ttcagcttgt tggcatccgt
961 acactgacag tcttgggtgc ccagccagat ctcctatctt atgaggactt ggagctggca
1021 gtgggtcacc tgtacagact gagcttcctg aaggaggatt cccagagttg cagggtggca
1081 gcactggaag catcaggaac cctggctgct ctctaccctg tggccttcag cagccacctc
1141 gtacccaagc tcgctgagga gctgcgtgta ggggagtcaa atttgactaa cggagatgag
1201 cccacccaat gctcccggca tctgtgctgt ctgcaagcct tgtcagctgt atcaacacat
1261 cccagcatcg tcaaggagac actgcctctg ctgctgcagc atctctggca agtgaacaga
1321 gggaatatgg ttgcacaatc cagtgacgtt attgctgtct gtcagagcct cagacagatg
1381 gcagaaaaat gtcagcagga ccctgagagt tgctggtatt tccaccagac agctatacct
1441 tgcctgcttg ccttggctgt gcaggcctct atgccagaga aggggccctc agttctgaga
1501 aaagtactat tggaggatga ggtgttggct gccatggtgt ctgtcattgg cactgctaca
1561 acccacctga gccctgagtt agctgcccag agtgtgacac acattgtgcc cctcttcttg
1621 gatggcaacg tgtcctttct gcctgaaaac agcttcccga gcagattcca gccattccag
1681 gatggctcct cagggcagag gcggctgatt gcactgctta tggcctttgt ctgctccctg
1741 cctcgaaatg tggaaatccc tcagctgaac caactcatgc gggagctttt ggaactgagc
1801 tgctgccaca gctgcccctt ttcttccacc gctgctgcca agtgctttgc aggactcctc
1861 aacaagcacc ctgcagggca gcagctggat gaattcctac agctagctgt ggacaaagtg
1921 gaggctggcc tggactctgg gccctgtcgt agtcaggcct tcactcttct tctctgggta
1981 acaaaggccc tagtgctcag ataccatcct ctcagctcct gccttacagc ccggctcatg
2041 ggcctcctga gtgacccaga attaggtcca gcagcagctg atggcttctc tctgctcatg
2101 tctgactgca ctgatgtgct gactcgtgct ggccatgccg aagtgcggat catgttccgc
2161 cagcggttct tcacagataa tgtgcctgct ttggtccagg gcttccatgc tgctccccaa
2221 gatgtgaagc caaactactt gaagggtctt tctcatgtac ttaacaggct gcccaagcct
2281 gtactcttgc cagagctgcc cacgcttctt tccttgctgc tggaggccct gtcctgccct
2341 gactgtgtgg tgcagctctc caccctcagc tgccttcagc ctcttctact ggaagcaccc
2401 caagtcatga gtcttcacgt ggacaccctc gtcaccaagt ttctgaacct cagctctagc
2461 ccttccatgg ctgtccggat cgccgcactg cagtgcatgc atgctctcac tcgcctgccc
2521 acccctgtgc tgctgccgta caaaccacag gtgattcggg ccttagccaa acccctggat
2581 gacaagaaga gactggtgcg caaggaagca gtgtcagcca gaggggagtg gtttctgttg
2641 gggagccctg gcagctgagc cctcagtcct ggcctagact gttctgacaa tctaacctgg
2701 gattactaac tgttgagcca tcttccccaa agcagggaaa ccactggtct ctgactgcct
2761 ttcccacaga cacagcacaa atgctaggcc tctgttgcat ggctgtacaa agaacataag
2821 agtccatatt tctagtggat ttgtaaaata agtgtgtgtg agacacttgc gtttgaagaa
2881 agatctaggg tcctgggtct cttgcattta tatgtcagaa aaggggcgat atgctgctga
2941 ggggtgagtg catatgagtg tggccctgag gaccagggct ggcagatgtt gtctacctgc
3001 tgaagaataa agatttcttt tggt
//