LOCUS AK024274 3198 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ14212 fis, clone NT2RP3003500, weakly similar
to SCY1 PROTEIN.
ACCESSION AK024274
VERSION AK024274.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3198)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3198
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3003500"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000007548"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 29..2236
/codon_start=1
/protein_id="BAB14869.1"
/translation="MGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYI
LSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNI
PEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFK
GLLKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPE
LGPVFKQQEPIQILLIFLQKMDLLLTRTPPDEIKNSVLPMVYRALEAPSIQIQELCLN
IIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDI
LPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLN
QFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNRMNVSEEMKVTNIGNQQ
IDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPL
KPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFST
PTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFN
ALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPT
MGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG"
BASE COUNT 1010 a 606 c 577 g 1005 t
ORIGIN
1 ttcgaataaa agtggagcct ggaaaataat gggttttgat ttttgtgtat catcaaccaa
61 tccttctgaa caagagccta aatttccttg taaagaatgg gacccaaatt taccttcatt
121 gtgtcttcca aatcctgaat atttggctcc tgaatacata ctttctgtga gctgtgaaac
181 agccagtgat atgtattctt taggaactgt tatgtatgct gtatttaata aagggaaacc
241 tatatttgaa gtcaacaagc aagatattta caagagtttc agtaggcagt tggatcagtt
301 gagtcgttta ggatctagtt cacttacaaa tatacctgag gaagttcgtg aacatgtaaa
361 gctactgtta aatgtaactc cgactgtaag accagatgca gatcaaatga caaagattcc
421 cttctttgat gatgttggtg cagtaacact gcaatatttt gataccttat tccaaagaga
481 taatcttcag aaatcacagt ttttcaaagg actgctaaag gttctaccaa aactgcccaa
541 gcgtgtcatt gtgcagagaa ttttgccttg tttgacttca gaatttgtaa accctgacat
601 ggtacctttt gttttgccca atgtcctact tattgctgag gaatgcacca aagaagaata
661 tgtcaaatta attcttcctg aacttggccc tgtgtttaag cagcaggagc caatccagat
721 tttgttaatt ttcctacaaa aaatggattt gctactaacc agaacccctc ctgatgagat
781 aaagaacagt gttctaccca tggtttacag agcactagaa gctccttcca ttcagatcca
841 ggagctctgt ctaaacatca ttccaacctt tgcaaatctt atagactacc catccatgaa
901 aaacgctttg ataccaagaa ttaaaaatgc ttgtctacaa acatcttccc ttgcggttcg
961 tgtaaattca ttagtgtgct taggaaagat tttggaatac ttggataagt ggttcgtact
1021 tgatgatatc ctacccttct tacaacaaat tccatccaag gaacctgcgg tcctcatggg
1081 aattttaggt atttacaaat gtacttttac tcataagaag ttgggaatca ccaaagagca
1141 gctggccgga aaagtgttgc ctcatcttat tcccctgagt attgaaaaca atcttaatct
1201 taatcagttc aattctttca tttccgtcat aaaagaaatg cttaatagat tggagtctga
1261 acataagact aaactggagc aacttcatat aatgcaagaa cagcagaaat ctttggatat
1321 aggaaatcga atgaatgttt ctgaggagat gaaagttaca aatattggga atcagcaaat
1381 tgacaaagtt tttaacaaca ttggagcaga ccttctgact ggcagtgagt ccgaaaataa
1441 agaggacggg ttacagaata aacataaaag agcatcactt acacttgaag aaaaacaaaa
1501 attagcaaaa gaacaagagc aggcacagaa gctgaaaagc cagcagcctc ttaaacccca
1561 agtgcacaca cctgttgcta ctgttaaaca gactaaggac ttgacagaca cactgatgga
1621 taatatgtca tccttgacca gcctttctgt tagtacccct aaatcttctg cttcaagtac
1681 tttcacttct gttccttcca tgggcattgg tatgatgttt tctacaccaa ctgataatac
1741 aaagagaaat ttgacaaatg gcctaaatgc caatatgggc tttcagactt caggattcaa
1801 catgcccgtt aatacaaacc agaacttcta cagtagtcca agcacagttg gagtgaccaa
1861 gatgactctg ggaacacctc ccactttgcc aaacttcaat gctttgagtg ttcctcctgc
1921 tggtgcaaag cagacccaac aaagacccac agatatgtct gcccttaata atctctttgg
1981 ccctcagaaa cccaaagtta gcatgaacca gttatcacaa cagaaaccaa atcagtggct
2041 taatcagttt gtacctcctc aaggttctcc aactatgggc agttcagtaa tggggacaca
2101 gatgaacgtg ataggacaat ctgcttttgg tatgcagggt aatcctttct ttaacccaca
2161 gaactttgca cagccaccaa ctactatgac caatagcagt tcagctagca atgatttaaa
2221 agatcttttt gggtgaggtg tcttacttct attttgaagg attatttcag tttcaatcat
2281 gggtgagctg atttacatct ttatatagtt ggcttggagg aagtacttct atgggaaagt
2341 gaacagttct gtgacaggaa acatctctgt ccatgccagc atagtagttg tatggacttc
2401 taaccagttg agttttttaa agcattgagg attttttcct cttaccaact cctcttcagg
2461 tttttaaaga cccagccctt cccaatctca aagagaaaaa ggaaactgag ttatcttgaa
2521 taacataact ttttaatcaa atgtttattt tggcttgtgg atcttggtgt tatttaaaaa
2581 attgaggtga tggtcattgc aagctcatct attaagtact atatggtaca cagtctatga
2641 gtcattagtc ttcattttaa tatgtaaaaa atcttgatgc tgtattgatt tgtttgcatt
2701 taagatgaca gtgagaaaat gataagcata aagagaagta tcaggttatt tgctttttcc
2761 aaacttttca gatgaactat tgtttagtac agagactgag caaatactac aaaattcaac
2821 ttaaccttca tttcattggt ttaaatgcgt tattaaccat cttaagtgca aactaatcat
2881 tgtaaattat attttagcat ggtctgcctc aaatagtaat gtatttttct gcattcactt
2941 ggatatattt agaatcactt ttttcctcct gtatcaagga agaggtatgt gctgatttgt
3001 ttggatattt gacaaggcac tctgatgtga cttccctgac tactaccttc atatttcatt
3061 tcaaattcaa acttctgagg ttgcagcata tatgaattgc attttcaaaa gaagatttgt
3121 aagaattaaa ctatatttat gagtaaactt ttgaggtttc tgctgtattg tttcaaatgt
3181 aataaacttt acttctgt
//