LOCUS AK024251 4445 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ14189 fis, clone NT2RP2006184, highly similar
to SLIT and NTRK-like protein 5 precursor.
ACCESSION AK024251
VERSION AK024251.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4445)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..4445
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2006184"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000007525"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 220..3096
/codon_start=1
/note="highly similar to SLIT and NTRK-like protein 5
precursor"
/protein_id="BAG51280.1"
/translation="MHTCCPPVTLEQDLHRKMHSWMLQTLAFAVTSLVLSCAETIDYY
GEICDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEFV
NYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQV
DYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYV
GLLQHMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLD
EVSKQELCPRRLISDYEMRPQTPLSTTGYLHTTPASVNSVATSSSAVYKPPLKPPKGT
RQPNKPRVRPTSRQPSKDLGYSNYGPSIAYQTKSPVPLECPTACSCNLQISDLGLNVN
CQERKIESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQD
RAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQ
LLFLNNNLLQAMPSGVFSGLTLLRLNLRSNHFTSLPVSGVLDQLKSLIQIDLHDNPWD
CTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSELLCPDYSDVVVSTPT
PSSIQVPARTSAVTPAVRLNSTGAPASLGAGGGASSVPLSVLILSLLLVFIMSVFVAA
GLFVLVMKRRKKNQSDHTSTNNSDVSSFNMQYSVYGGGGGTGGHPHAHVHHRGPALPK
VKTPAGHVYEYIPHPLGHMCKNPIYRSREGNSVEDYKDLHELKVTYSSNHHLQQQQQP
PPPPQQPQQQPPPQLQLQPGEEERRESHHLRSPAYSVSTIEPREDLLSPVQDADRFYR
GILEPDKHCSTTPAGNSLPEYPKFPCSPAAYTFSPNYDLRRPHQYLHPGAGDSRLREP
VLYSPPSAVFVEPNRNEYLELKAKLNVEPDYLEVLEKQTTFSQF"
BASE COUNT 1077 a 1196 c 1058 g 1114 t
ORIGIN
1 cccggaaccc gcggtcgcca ccgcggcggc ggccccaggc tggaggcgtc cgggcgcctc
61 tttcctccag cctctgggac tgcgctgctc gcagtctcct cgccctgcct gggcttgaga
121 aacctagtgc ataccccaaa gagggttttt gtgtatgtgt gtgtttttaa agggtggcta
181 tgatgactgg gccttggaga tgtgagactg ggaggtaaaa tgcacacttg ctgcccccca
241 gtaactttgg aacaggacct tcacagaaaa atgcatagct ggatgctgca gactctagcg
301 tttgctgtaa catctctcgt cctttcgtgt gcagaaacca tcgattatta tggggaaatc
361 tgtgacaatg catgtccttg tgaggaaaag gacggcattt taactgtgag ctgtgaaaac
421 cgggggatca tcagtctctc tgaaattagc cctccccgtt tcccaatcta ccacctcttg
481 ttgtccggaa accttttgaa ccgtctctat cccaatgagt ttgtcaatta cactggggct
541 tcaattttgc atctaggtag caatgttatc caggacattg agaccggggc tttccatggg
601 ctacggggtt tgaggagatt gcatctaaac aataataaac tggaacttct gcgagatgat
661 accttccttg gcttggagaa cctggagtac ctacaggtcg attacaacta catcagcgtc
721 attgaaccca atgcttttgg gaaactgcat ttgttgcagg tgcttatcct caatgacaat
781 cttttgtcca gtttacccaa caatcttttc cgttttgtgc ccttaacgca cttggacctc
841 cgggggaacc ggctgaaact tctgccctac gtggggctct tgcagcacat ggataaagtt
901 gtggagctac agctggagga aaacccttgg aattgttctt gtgagctgat ctctctaaag
961 gattggttgg acagcatctc ctattcagcc ctggtggggg atgtagtttg tgagaccccc
1021 ttccgcttac acggaaggga cttggacgag gtatccaagc aggaactttg cccaaggaga
1081 cttatttctg actacgagat gaggccgcag acgcctttga gcaccacggg gtatttacac
1141 accaccccgg cgtcagtgaa ttctgtggcc acttcttcct ctgctgttta caaaccccct
1201 ttgaagcccc ctaaggggac tcgccaaccc aacaagccca gggtgcgccc cacctctcgg
1261 cagccctcta aggacttggg ctacagcaac tatggcccca gcatcgccta tcagaccaaa
1321 tccccggtgc ctttggagtg tcccaccgcg tgctcttgca acctgcagat ctctgatctg
1381 ggcctcaacg taaactgcca ggagcgaaag atcgagagca tcgctgaact gcagcccaag
1441 ccctacaatc ccaagaaaat gtatctgaca gagaactaca tcgctgtcgt gcgcaggaca
1501 gacttcctgg aggccacggg gctggacctc ctgcacctgg ggaataaccg catctcgatg
1561 atccaggacc gcgctttcgg ggatctcacc aacctgaggc gcctctacct gaatggcaac
1621 aggatcgaga ggctgagccc ggagttattc tatggcctgc agagcctgca gtatctcttc
1681 ctccagtaca atctcatccg cgagattcag tctggaactt ttgacccggt cccaaacctc
1741 cagctgctat tcttgaataa caacctcctg caggccatgc cctcaggcgt cttctctggc
1801 ttgaccctcc tcaggctaaa cctgaggagt aaccacttca cctccttgcc agtgagtgga
1861 gttttggacc agctgaagtc actcatccaa atcgacctgc atgacaatcc ttgggattgt
1921 acctgtgaca ttgtgggcat gaagctgtgg gtggagcagc tcaaagtggg cgtcctagtg
1981 gacgaggtga tctgtaaggc gcccaaaaaa ttcgctgaga ccgacatgcg ctccattaag
2041 tcggagctgc tgtgccctga ctattcagat gtagtagttt ccacgcccac accctcctct
2101 atccaggtcc ctgcgaggac cagcgccgtg actcctgcgg tccggttgaa tagcaccggg
2161 gcccccgcga gcttgggcgc aggcggaggg gcgtcgtcgg tgcccttgtc tgtgttaatt
2221 ctcagcctcc tgctggtttt catcatgtcc gtcttcgtgg ccgccgggct cttcgtgctg
2281 gtcatgaagc gcaggaagaa gaaccagagc gaccacacca gcaccaacaa ctccgacgtg
2341 agctccttta acatgcagta cagcgtgtac ggcggcggcg gcggcacggg cggccaccca
2401 cacgcgcacg tgcatcaccg cgggcccgcg ctgcccaagg tgaagacgcc cgcgggccac
2461 gtgtatgaat acatccccca cccactgggc cacatgtgca aaaaccccat ctaccgctcc
2521 cgagagggca actccgtaga ggattacaaa gacctgcacg agctcaaggt cacctacagc
2581 agcaaccacc acctgcagca gcagcagcag ccgccgccgc caccgcagca gccacagcag
2641 cagcccccgc cgcagctgca gctgcagccc ggggaggagg agaggcggga aagccaccac
2701 ttgcggagcc ccgcctacag cgtcagcacc atcgagcccc gggaggacct gctgtcgccg
2761 gtgcaggacg ccgaccgctt ttacaggggc attttagaac cagacaaaca ctgctccacc
2821 acccccgccg gcaatagcct cccggaatat cccaaattcc cgtgcagccc cgctgcttac
2881 actttctccc ccaactatga cctgagacgc ccccatcagt atttgcaccc gggggcaggg
2941 gacagcaggc tacgggaacc ggtgctctac agccccccga gtgctgtctt tgtagaaccc
3001 aaccggaacg aatatctgga gttaaaagca aaactaaacg ttgagccgga ctacctcgaa
3061 gtgctggaaa aacagaccac gtttagccag ttctaaaagc aaagaaactc tcttggagct
3121 tttgcattta aaacaaacaa gcaagcagac acacacagtg aacacatttg attaattgtg
3181 ttgtttcaac gtttagggtg aagtgccttg gcacgggatt tctcagcttc ggtggaagat
3241 acgaaaaggg tgtgcaattt cctttaaaat ttacacgtgg gaaacatttg tgtaaactgg
3301 gcacatcact ttctcttctt gcgtgtgggg caggtgtgga gaagggcttt aaggaggcca
3361 atttgctgcg cgggtgacct gtgaaaggtc acagtcattt ttgtagtggt tggaagtgct
3421 aagaatggtg gatgatggca gagcatagat tctactcttc ctcttttgct tcctccccct
3481 cccccgcccc tgccccacct ctctttctcc ccttttaagc catgggtggg tctaactggc
3541 ttttgtggag aaattagcac accccaactt taataggaaa tttgttctct ttttccgccc
3601 ctctccttct ctcctcccct cccctccctt ctcattcctt ttctttgttt ttaaaggatg
3661 tgtttgtatg cattctggac atttgaatta aaaaaaaaag tattgtgatc ctgtaaagga
3721 tcaccataga tgtggacaaa tcattaaaat tacagagcta tatgatccat aattgattag
3781 tcaaaataac ttgttgatga aatatacaaa tattttattg tagcacctat ttttatatgc
3841 acatttagca ttcctctttc cttcactatt tagcctatga ttttgcagag gtgtcacact
3901 gtattaggat ctgcatttct aaaactgacg tggtatcagg aaggcatttt caatcattca
3961 aaatgtggag aatttaatgg ctaaatcttt aaaagccaat gcaacccacc caattgaatc
4021 tgcattttct tttaagaaaa cagagctgat tgtatcccaa tgtattttaa aaaatagggc
4081 aattgattgg gccattccga gagaattgtt tgcaagtttt gggttttatt agaaaatatt
4141 tgaaagtatt tttattaatg aaccaaaatg acatgttcat ttgactacta ttgtagccga
4201 ttttcgattg tttaaccaaa cccagttgca tttgtacaga tccacgtgta ctggcacctc
4261 agaagaccaa atcatggact gtacaagtct ctatacaatg tctttatccc tgtgggcagc
4321 aagcaatgat gataatgaca aacaggatat ctgtaagatg gggctactgt tgttacagtc
4381 tcatatgtat cccagcacat gtaatttttt aaatagtttc tgaataaaca cttgataact
4441 atgtc
//