LOCUS AK024245 3076 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ14183 fis, clone NT2RP2004920, weakly similar
to TRANSCRIPTIONAL REGULATOR ATRX.
ACCESSION AK024245
VERSION AK024245.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3076)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3076
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2004920"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000007519"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 23..2599
/codon_start=1
/protein_id="BAB14857.1"
/translation="MMIAKEENLQRTTQPSINESESDPFEVVRDDFKSGVHKLHSLIG
LGIKNRVSCHDSDDDIMRNDREYDSGDTDEIIAMKKNVAKVKNSTEFSQMEKSTKKTS
FKNRENCELSDHCIKLQKRKSNVESALSHGLKSLNRKSPSHSGSSEDADSASELADSE
GGEEYNAMMENCLRVNLTLADLEQLAGSDLKVPNEDTKSDGPETTTQCKFDRGSKSPK
TPTGLRRGRQCIRPAEIVASLLEGEENTCGKQKPKENNLKPKFQAFKGVGCLYEKESM
KKSLKDSVASNNKDQNSMKHEDPSIISMEDGSPYVNGSLGEVTPCQHAKKANGPNYIQ
PQKRQTTFESQDRKAVSPSSSEKRSKNPISRPLEGKKSLSLSAKTHNIGFDKDSCHST
TKTEASQEERSDSSGLTSLKKSPKVSSKDTRGIKTDFSLSISNSSDVGAKDKHAEDNE
KRLAALEARQKAKEVQKKLVHNALANLDGHPEDKPTHIIFGSDSECETEETSTQEQSH
PGEEWVKESMGKTSGKLFDSSDDDESDSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGT
DDRFRMDSRFLETDSEEEQEEVNEKKTAEEEELAEEKKKALNVVQSVLQINLSNSTNR
GSVAAKKFKDIIHYDPTKQDHATYERKRDDKPKESKAKRKKKREEAEKLPEVSKEMYY
NIAMDLKEIFQTTKYTSEKEEGTPWNEDCGKEKPEEIQDPAALTSDAEQPSGFTFSFF
DSDTKDIKEETYRVETVKPGKIVWQEDPRLQDSSSEEEDVTEETDHRNSSPGEASLLE
KETTRFFFFSKNDERLQGSDLFWRGVGSNMSRNSWEARTTNLRMDCRKKHKDAKRKMK
PK"
BASE COUNT 1098 a 553 c 677 g 748 t
ORIGIN
1 tgattctgaa gatgaattga gaatgatgat tgcgaaagag gaaaacttac agagaactac
61 acaaccctca ataaatgaat ctgaaagtga tccttttgaa gttgtaaggg atgatttcaa
121 atcaggcgtt cacaaactgc attctttaat aggtttaggt atcaaaaatc gtgtctcttg
181 ccatgatagt gatgatgata ttatgagaaa tgatcgtgag tatgactcag gagatacaga
241 tgaaattatt gcgatgaaaa aaaatgttgc taaggtcaaa aacagtacag aattttcaca
301 aatggaaaaa tctacgaaga aaacttcttt caaaaataga gaaaactgtg agctttctga
361 tcactgtatt aaactacaaa aaagaaaaag caatgtagag tcagccctca gtcatggatt
421 aaagtctctt aatcgtaaat ctccctctca ctccggtagc agtgaagatg ctgattctgc
481 atcagaatta gctgactctg aaggaggtga ggagtataat gccatgatgg aaaactgcct
541 tcgtgtgaat ctcactttag ctgatttgga acaattggct ggcagtgatc tgaaggttcc
601 aaatgaagat actaagagtg atggaccaga aaccaccacc caatgcaagt ttgacagagg
661 ctccaagagc cccaagactc ccactggcct ccgcagaggc cgacagtgta ttcgtcctgc
721 ggagattgtg gcttccctgt tagaaggaga ggagaacacc tgtggcaaac agaaaccaaa
781 ggaaaacaat ttaaagccaa aatttcaggc tttcaaggga gtaggctgtc tatatgaaaa
841 ggagtcaatg aaaaaatcct tgaaagacag tgttgcctct aacaataaag atcagaattc
901 catgaaacat gaggatccca gtatcatatc catggaagat gggtccccat atgttaatgg
961 ctcattaggt gaagtgactc catgccaaca tgcaaagaag gcgaatggcc caaactatat
1021 tcagcctcaa aaaagacaga ccacttttga aagccaggat cgcaaggcag tgtcccctag
1081 cagttctgaa aagagaagta agaatcctat ttctaggcca ttagaaggta agaagtcctt
1141 aagtcttagt gcaaagactc acaacatagg ctttgacaaa gacagctgcc atagtaccac
1201 aaagacagaa gcttcacagg aagagcggtc tgattcaagc ggcctcacat ctctcaagaa
1261 atcaccaaag gtctcatcca aggacactcg gggaatcaaa actgatttct cactttctat
1321 tagtaattcg tcagatgtgg gtgctaaaga taagcatgct gaagacaatg agaagcgttt
1381 ggcagccttg gaagcgaggc aaaaagcaaa agaagtgcag aagaagctgg tgcataatgc
1441 tctggcaaat ttggatggtc atccagagga taagccaacg cacatcatct tcggttctga
1501 cagtgaatgt gaaacagagg agacatcgac tcaggagcag agccatccag gagaggaatg
1561 ggtgaaagag tctatgggta aaacatcagg gaagctgttt gatagcagtg atgatgacga
1621 atctgattct gaagatgaca gtaataggtt caaaattaaa cctcagtttg agggcagagc
1681 tggacagaag ctcatggatt tacagtcgca ctttggcacc gatgacagat tccgcatgga
1741 ctctcgattt ctagaaactg acagtgaaga ggaacaggaa gaggtaaatg aaaagaaaac
1801 tgctgaggaa gaagagcttg ctgaagaaaa aaagaaagcc ctgaatgttg tacaaagtgt
1861 tttgcaaatc aacttaagca attctacaaa cagaggatca gtagctgcta agaaatttaa
1921 ggacatcata cattatgatc caacgaagca agaccatgcc acttacgaaa gaaaaagaga
1981 tgataaacca aaagaaagta aagcaaaacg aaaaaagaaa agggaggaag ctgagaaact
2041 acctgaggtg tctaaagaaa tgtattataa tattgctatg gatctgaaag aaatattcca
2101 aactacaaaa tataccagtg aaaaggaaga gggcacaccc tggaatgagg actgtggtaa
2161 agagaaacct gaggaaatcc aggaccctgc agctctgacc agtgacgctg agcagcccag
2221 cgggttcacg ttctcttttt ttgattcaga cactaaagac ataaaggaag agacctacag
2281 agttgaaaca gtgaaacctg gaaagattgt ctggcaggaa gaccctcgtt tacaagacag
2341 cagttcagaa gaggaagatg ttactgaaga aacagatcac agaaactcca gtcctggaga
2401 agcatcatta cttgagaaag agaccactag atttttcttt ttctctaaga atgatgaacg
2461 acttcaaggt tctgacttat tctggagagg agtaggaagt aatatgagca ggaactcttg
2521 ggaggccaga acaaccaacc tgcgtatgga ttgtcgaaag aaacataaag acgcaaaaag
2581 gaaaatgaaa ccaaaataat aaatgtcagc tggttttgat actgaatgtg aacaaggctc
2641 acctaaggaa actgacccag aaaacagttt tagctgacaa agaagaaatt tcagagtgaa
2701 ggaattttaa aaatctggct gacggaatat cattctggtt gccatctttt tctgtggaac
2761 tcctctgcat ttcttcctaa gtaattactt caaaaattaa attcaacttc ttataaagga
2821 agaacaagat agtccttgaa aatacttttt gtatataatc tctttgccct ctatcctgag
2881 taactaatgg acatcttctc atgcaaggtt tacatgaagc cttttttaat aaatgagtca
2941 aagcacttgt attttccagc ctaggctttg tgtgaattat aggctatttg aaattttatt
3001 tctgattatg tcaaatacac cttccatttt gtcatttttg tttaaactga taaattacaa
3061 gtcaacattg agtttt
//