LOCUS AK024140 4331 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ14078 fis, clone HEMBB1002044, moderately
similar to Mus musculus mRNA for vascular cadherin-2.
ACCESSION AK024140
VERSION AK024140.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4331)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..4331
/clone="HEMBB1002044"
/clone_lib="HEMBB1"
/db_xref="H-InvDB:HIT000007414"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly body"
CDS 350..3913
/codon_start=1
/protein_id="BAB14837.1"
/translation="MMQLLQLLLGLLGPGGYLFLLGDCQEVTTLTVKYQVSEEVPSGT
VIGKLSQELGREERRRQAGAAFQVLQLPQALPIQVDSEEGLLSTGRRLDREQLCRQWD
PCLVSFDVLATGDLALIHVEIQVLDINDHQPRFPKGEQELEISESASLRTRIPLDRAL
DPDTGPNTLHTYTLSPSEHFALDVIVGPDETKHAELIVVKELDREIHSFFDLVLTAYD
NGNPPKSGTSLVKVNVLDSNDNSPAFAESSLALEIQEDAAPGTLLIKLTATDPDQGPN
GEVEFFLSKHMPPEVLDTFSIDAKTGQVILRRPLDYEKNPAYEVDVQARDLGPNPIPA
HCKVLIKVLDVNDNIPSIHVTWASQPSLVSEALPKDSFIALVMADDLDSGNNGLVHCW
LSQELGHFRLKRTNGNTYMLLTNATLDREQWPKYTLTLLAQDQGLQPLSAKKQLSIQI
SDINDNAPVFEKSRYEVSTRENNLPSLHLITIKAHDADLGINGKVSYRIQDSPVAHLV
AIDSNTGEVTAQRSLNYEEMAGFEFQVIAEDSGQPMLASSVSVWVSLLDANDNAPEVV
QPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIVAR
DADSGANGEPLYSIRSGNEAHLFILNPHTGQLFVNVTNASSLIGSEWELEIVVEDQGS
PPLQTRALLRVMFVTSVDHLRDSARKPGALSMSMLTVICLAVLLGIFGLILALFMSIC
RTEKKDNRAYNCREAESTYRQQPKRPQKHIQKADIHLVPVLRGQAGEPCEVGQSHKDV
DKEAMMEAGWDPCLQTPFHLTPTLYRTLRNQGNQGAPAESREVLQDTVNLLFNHPRQR
NASRENLNLPEPQPATGQPRSRPLKVAGSPTGRLAGDQGSEEAPQRPPASSATLRRQR
HLNGKVSPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQQISQLLSLLYQG
QFQPKPNHRGNKYLAKPGGSRSAIPDTDGPSARAGGQTDPEQEEGPLDPEEDLSVKQL
LEEELSSLLDPSTGLALDRLSAPDPAWMARLSLPLTTNYRDNVISPDAAATEEPRTFQ
TFGKAEAPELSPTGTRLASTFVSEMSSLLEMLLEQRSSMPVEAASEALRRLSVCGRTL
SLDLATSAASGMKVQGDPGGKTGTEGKSRGSSSSSSSSRCL"
BASE COUNT 1032 a 1227 c 1214 g 858 t
ORIGIN
1 agcaactgtt tggcagtcag agtcccacat cctgctcaac tgggtcaggt ccctcttaga
61 ccagctcttg tccatcattt gctgaagtgg accaactagt tccccggtag ggggtctccc
121 ctggcaattc ttgatcggcg tttggacatc tcagatcgct tccaatgaag atggccttgc
181 cttggggtcc tgcttgtttc ataatcatct aactatggga caaggttgtg ccggcagctc
241 tgggggaagg agcacggggc tgatcaagcc atccaggaaa cactggagga cttgtccagc
301 cttgaaagaa ctctagtggt ttctgaatct agcccacttg gcggtaagca tgatgcaact
361 tctgcaactt ctgctggggc ttttggggcc aggtggctac ttatttcttt taggggattg
421 tcaggaggtg accactctca cggtgaaata ccaagtgtca gaggaagtgc catctggtac
481 agtgatcggg aagctgtccc aggaactggg ccgggaggag aggcggaggc aagctggggc
541 cgccttccag gtgttgcagc tgcctcaggc gctccccatt caggtggact ctgaggaagg
601 cttgctcagc acaggcaggc ggctggatcg agagcagcta tgccgacagt gggatccctg
661 cctggtttcc tttgatgtgc ttgccacagg ggatttggct ctgatccatg tggagatcca
721 agtgctggac atcaatgacc accagccacg gtttcccaaa ggcgagcagg agctggaaat
781 ctctgagagc gcctctctgc gaacccggat ccccctggac agagctcttg acccagacac
841 aggccctaac accctgcaca cctacactct gtctcccagt gagcactttg ccttggatgt
901 cattgtgggc cctgatgaga ccaaacatgc agaactcata gtggtgaagg agctggacag
961 ggaaatccat tcattttttg atctggtgtt aactgcctat gacaatggga acccccccaa
1021 gtcaggtacc agcttggtca aggtcaacgt cttggactcc aatgacaata gccctgcgtt
1081 tgctgagagt tcactggcac tggaaatcca agaagatgct gcacctggta cgcttctcat
1141 aaaactgacc gccacagacc ctgaccaagg ccccaatggg gaggtggagt tcttcctcag
1201 taagcacatg cctccagagg tgctggacac cttcagtatt gatgccaaga caggccaggt
1261 cattctgcgt cgacctctag actatgaaaa gaaccctgcc tacgaggtgg atgttcaggc
1321 aagggacctg ggtcccaatc ctatcccagc ccattgcaaa gttctcatca aggttctgga
1381 tgtcaatgac aacatcccaa gcatccacgt cacatgggcc tcccagccat cactggtgtc
1441 agaagctctt cccaaggaca gttttattgc tcttgtcatg gcagatgact tggattcggg
1501 aaacaatggt ttggtccact gctggctgag ccaagagctg ggccacttca ggctgaaaag
1561 aactaatggc aacacataca tgttgctaac caatgccaca ctggacagag agcagtggcc
1621 caaatatacc ctcactctgt tagcccaaga ccaaggactc cagcccttat cagccaagaa
1681 acagctcagc attcagatca gtgacatcaa cgacaatgca cctgtgtttg agaaaagcag
1741 gtatgaagtc tccacgcggg aaaacaactt accctctctt cacctcatta ccatcaaggc
1801 tcatgatgca gacttgggca ttaatggaaa agtctcatac cgcatccagg actccccagt
1861 tgctcactta gtagctattg actccaacac aggagaggtc actgctcaga ggtcactgaa
1921 ctatgaagag atggccggct ttgagttcca ggtgatcgca gaggacagcg ggcaacccat
1981 gcttgcatcc agtgtctctg tgtgggtcag cctcttggat gccaatgata atgccccaga
2041 ggtggtccag cctgtgctca gcgatggaaa agccagcctc tccgtgcttg tgaatgcctc
2101 cacaggccac ctgctggtgc ccatcgagac tcccaatggc ttgggcccag cgggcactga
2161 cacacctcca ctggccactc acagctcccg gccattcctt ttgacaacca ttgtggcaag
2221 agatgcagac tcgggggcaa atggagagcc cctctacagc atccgcagtg gaaatgaagc
2281 ccacctcttc atcctcaacc ctcatacggg gcagctgttc gtcaatgtca ccaatgccag
2341 cagcctcatt gggagtgagt gggagctgga gatagtagta gaggaccagg gaagcccccc
2401 cttacagacc cgagccctgt tgagggtcat gtttgtcacc agtgtggacc acctgaggga
2461 ctcagcccgc aagcctgggg ctttgagcat gtcgatgctg acggtgatct gcctggctgt
2521 actgctgggc atcttcgggt tgatcctggc tttgttcatg tccatctgcc ggacagaaaa
2581 gaaggacaac agggcctaca actgtcggga ggccgagtcc acctaccgcc agcagcccaa
2641 gaggccccag aaacacattc agaaggcaga catccacctc gtgcctgtgc tcaggggtca
2701 ggcaggtgag ccttgtgaag tcgggcagtc ccacaaagat gtggacaagg aggcgatgat
2761 ggaagcaggc tgggacccct gcctgcagac ccccttccac ctcaccccga ccctgtacag
2821 gacgctgcgt aatcaaggca accagggagc accggcggag agccgagagg tgctgcaaga
2881 cacggtcaac ctccttttca accatcccag gcagaggaat gcctcccggg agaacctgaa
2941 ccttcccgag ccccagcctg ccacaggcca gccacgttcc aggcctctga aggttgcagg
3001 cagccccaca gggaggctgg ctggagacca gggcagtgag gaagccccac agaggccacc
3061 agcctcctct gcaaccctga gacggcagcg acatctcaat ggcaaagtgt cccctgagaa
3121 agaatcaggg ccccgtcaga tcctgcggag cctggtccgg ctgtctgtgg ctgccttcgc
3181 cgagcggaac cccgtggagg agctcactgt ggattctcct cctgttcagc aaatctccca
3241 gctgctgtcc ttgctgtatc agggccaatt ccagcccaaa ccaaaccacc gaggaaataa
3301 gtacttggcc aagccaggag gcagcaggag tgcaatccca gacacagatg gcccaagtgc
3361 aagggctgga ggccagacag acccagaaca ggaggaaggg cctttggatc ctgaagagga
3421 cctctctgtg aagcaactgc tagaagaaga gctgtcaagt ctgctggacc ccagcacagg
3481 tctggccctg gaccggctga gcgcccctga cccggcctgg atggcgagac tctctttgcc
3541 cctcaccacc aactaccgtg acaatgtgat ctccccggat gctgcagcca cggaggagcc
3601 gaggaccttc cagacgttcg gcaaggcaga ggcaccagag ctgagcccaa caggcacgag
3661 gctggccagc acctttgtct cggagatgag ctcactgctg gagatgctgc tggaacagcg
3721 ctccagcatg cccgtggagg ccgcctccga ggcgctgcgg cggctctcgg tctgcgggag
3781 gaccctcagt ttagacttgg ccaccagtgc agcctcaggc atgaaagtgc aaggggaccc
3841 aggtggaaag acggggactg agggcaagag cagaggcagc agcagcagca gcagcagcag
3901 caggtgcctg tgaacatacc tcagacgcct ctggatccaa gaaccagggg cctgaggatc
3961 tgtggacaag agctggtttc taaaatcttg taactcacta gctagcggcg gcctgagaac
4021 tttagggtga ctgatgctac ccccacagag gaggcaagag ccccaggact aacagctgac
4081 tgaccaaagc agccccttgt aagcagctct gagtcttttg gaggacaggg acggtttgtg
4141 gctgagataa gtgtttcctg gcaaaacata tgtggagcac aaagggtcag tcctctggca
4201 gaacagatgc cacggagtat cacaggcagg aaaggatggc cttcttgggt agcaggagtc
4261 agggggctgt accctggggg tgccaggaaa tgctctctga cctatcaata aaggaaaagc
4321 agtgattcat t
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