LOCUS AK024064 1757 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ14002 fis, clone Y79AA1002307, highly similar
to Homo sapiens astrotactin 2 (ASTN2), transcript variant 4, mRNA.
ACCESSION AK024064
VERSION AK024064.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1757)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..1757
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="Y79AA1002307"
/clone_lib="Y79AA1"
/db_xref="H-InvDB:HIT000007338"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 208..1395
/codon_start=1
/note="highly similar to Homo sapiens astrotactin 2
(ASTN2), transcript variant 4, mRNA"
/protein_id="BAG51261.1"
/translation="MPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRR
PGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSAPMSSYWCSGKGDVIDDWCRCD
LSAFDANGLPNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKV
DEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYK
FTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQMAYNT
LMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLR
SAYIQSRVETVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYYLTLSKV
SPF"
BASE COUNT 397 a 469 c 482 g 409 t
ORIGIN
1 gcttgtcgtg cagctggccc caagcgcgcg gggcaaggcg gccctgcagg ggtgagcttt
61 cctctgagaa cccggggcct tagcgacacg taatccggtt ttccgtctcc ttggtgcaga
121 tgaagaaacc gacgcccatg ggcgaaaggg acctgctcaa gttcactcaa gaccacagag
181 ctgggcagca agaaggagct caagtccatg cccttcatca cctacctctc aggtttgctg
241 acagcccaga tgctgtcaga tgaccagctc atttcaggtg tggagattcg ctgtgaggag
301 aaggggcgct gtccatctac ctgtcacctt tgccgccggc caggcaagga gcagctgagc
361 cccacaccag tgctgctgga aatcaaccgt gtggtgccac tttataccct catccaagac
421 aatggcacaa aggaggcctt caagagtgca ccgatgagtt cctactggtg ctcagggaaa
481 ggggatgtga tcgatgactg gtgcaggtgt gacctcagcg cctttgatgc caatgggctc
541 cccaactgca gcccccttct gcagccggtg ctgcggctgt ccccaacagt ggagccctcc
601 agtactgtgg tctccttgga gtgggtggat gttcagccag ctattgggac caaggtctcc
661 gactatattc tgcagcataa gaaagtggat gaatacacag acactgacct gtacacagga
721 gaattcctga gttttgctga tgacttactc tctggcctgg gcacatcttg tgtagcagct
781 ggtcggagcc atggagaggt ccctgaagtc agtatctact cagtcatctt caagtgtctg
841 gagcccgacg gtctctacaa gttcactctg tatgctgtgg atacacgagg gaggcactca
901 gagctaagca cggtgaccct gaggacggcc tgtccactgg tagatgacaa caaggcagaa
961 gaaatagctg acaagatcta caatctgtac aatgggtaca caagtggaaa ggagcagcag
1021 atggcctaca acacactgat ggaggtctca gcctcgatgc tgttccgagt ccagcaccac
1081 tacaactctc actatgaaaa gtttggcgac ttcgtctgga gaagtgagga tgagctgggg
1141 cccaggaagg cccacctgat tctacggcga ctggagaggg tgagtagcca ctgctccagc
1201 ctcctgcgga gtgcctacat ccagagccgc gtggaaacag tgccctatct tttctgccgc
1261 agcgaggagg tccggcctgc aggcatggtg tggtatagca tcctcaagga caccaaaatc
1321 acgtgtgagg agaagatggt gtcaatggcc cgaaacacat attatttgac tctatcaaaa
1381 gtctctcctt tttaaacctt ttcttatgga tggctgtcaa tcccgaggca gaagttttca
1441 ggtggagacc aagcggcctt tgctcttctt ccttcttcct gccacactct gctttcttcc
1501 tgccatggac ccctggagga gacctatgga gggacagttt tgacctgacc cctagaggag
1561 acagttttga cctcttcagc accaggaagg aagctctgag gatggttgca gtgaggaagc
1621 atgggtcttt aaggacttct ctctcttttt tgctggacat tattgagttt gtgggaccct
1681 gcctcttcct gctacctgtg ggtctgccca gagtccctgc aggcctgtcc atgcattaaa
1741 aattcctatt gtctctc
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