LOCUS AK023840 5834 bp mRNA linear HUM 03-JUN-2021
DEFINITION Homo sapiens cDNA FLJ13778 fis, clone PLACE4000431, highly similar
to H.sapiens gene for U5 snRNP-specific 200kD protein.
ACCESSION AK023840
VERSION AK023840.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5834)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sato,H., Sugano,S., Takahashi-Fujii,A.,
Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R.,
Takeuchi,K., Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K.,
Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and
Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..5834
/clone="PLACE4000431"
/clone_lib="PLACE4"
/db_xref="H-InvDB:HIT000007114"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 120..2444
/codon_start=1
/protein_id="BAB14698.1"
/translation="MMILYCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKE
DLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGSHFMANKR
CQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQ
SKLYRAALETAENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAP
MRSLVQEMVGSFGKRLATYGITVAELTGDHQLSKEEISATQIIVCTPEKWDIITRKGG
ERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYE
DVATFLRVDPAKGLFYFDNSFRPVPLERTYVGITEKKAIKRFQIMNEIVYEKIMEHAG
KNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELK
DLLLYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQV
YSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIES
QMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLL
DQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKP
SLSEIELFRVFSLSSEFKNITVREVEKLELQKLLERVPIPVKESIEEPSAKINVLLQA
FISQLKLEGFALMADMVYVTQSAGRLMRAILKLS"
misc_difference 2431^2432
/inference="similar to sequence:INSD:AC021188.4"
/inference="similar to sequence:INSD:AK024391.1"
/replace="t"
BASE COUNT 1447 a 1519 c 1536 g 1332 t
ORIGIN
1 cagatgaagt attggagatt ttgaagacgg ccagtgatga tcgggaatgt gaaaatcagc
61 tggttctgct gcttggtttc aacacctttg atttcattaa agtgttgcgg cagcacagga
121 tgatgatttt atactgtacc ttgctggcca gtgcacaaag tgaagctgaa aaggaaagga
181 ttatgggaaa gatggaagct gacccagagc tatccaagtt cctctaccag cttcatgaaa
241 ccgagaagga ggatctgatc cgagaggaaa ggtcccggag agagcgagtg cgtcagtctc
301 gaatggacac agatctggaa accatggatc tcgaccaggg tggagaggca ctggctccac
361 ggcaggttct ggacttggag gacctggttt ttacccaagg gagccacttt atggccaata
421 aacgctgtca gcttcctgat ggatccttcc gtcgccagcg taagggctat gaagaggtgc
481 atgtgcctgc tctgaagccc aagccctttg gctcagaaga acaactgctt ccagtggaaa
541 agctgccaaa gtatgcccag gctgggtttg agggcttcaa aacactgaat cggatccaga
601 gtaagctcta ccgtgctgcc cttgagacgg ctgagaatct gctgctgtgt gctcctactg
661 gtgctgggaa gaccaacgtg gccctgatgt gcatgctccg agagattggg aaacacataa
721 acatggacgg caccatcaat gtggatgact tcaagattat ctacattgcc cccatgcgct
781 ccttggtgca ggagatggtg ggcagctttg gaaagcgcct ggccacttat ggcatcactg
841 ttgctgaact gactggggac caccagctgt ccaaagaaga gatcagtgcc actcagatca
901 tcgtctgcac ccccgagaag tgggacatca tcacccgcaa gggtggtgag cgcacctaca
961 cccagctggt gcggctcatc attctggatg agattcatct tctccacgat gacagaggtc
1021 ctgtcttaga agctttagtg gccagggcca tccgaaacat tgagatgacc caagaggatg
1081 tccgactcat tggtctcagt gccaccctac ccaactatga agatgtagcc acctttctac
1141 gtgttgaccc tgccaagggt ctcttttact ttgacaacag cttccgtcca gtgcctctgg
1201 aacggacata tgtgggtatc acagagaaaa aagctatcaa gcgtttccag atcatgaatg
1261 aaatcgtcta tgaaaaaatc atggaacatg ctggaaaaaa tcaggtgctg gtgtttgtcc
1321 actcccggaa ggagactgga aagacagcca gggccatccg ggacatgtgc ctagaaaagg
1381 acactctggg tctgtttctg agggagggct cagcctccac agaagtcctg cgaacagaag
1441 ctgagcagtg caagaaccta gagctgaagg atcttctgct ttatggcttt gctattcatc
1501 acgcaggcat gaccagggtt gaccgaacac tcgtggagga tctttttgct gataaacata
1561 ttcaggtttt agtttccaca gcaactctag cttggggtgt gaatctccct gcacatacag
1621 tcatcatcaa aggcacccag gtgtacagtc cagagaaggg gcgttggaca gaactgggag
1681 cactggacat tctgcagatg ctgggacgtg ccggaagacc ccagtatgac accaagggtg
1741 aaggcatact catcacatct catggggagc tacagtacta cctgtccctc ctcaatcaac
1801 aacttcctat tgaaagccag atggtttcaa agcttcctga catgctcaat gcagaaatcg
1861 tgctaggaaa tgtccagaat gccaaggatg cggtgaactg gctgggctat gcctacctct
1921 atatccgaat gctgcgatcc ccaaccctct atggcatctc tcatgatgac ctcaagggag
1981 atcccctgct ggaccagcgc cgactagatc tggttcatac agctgccctg atgctggaca
2041 agaacaatct ggtcaagtac gacaagaaga cgggcaactt ccaggtgaca gaactgggcc
2101 gtatagccag ccactactac atcaccaatg atacagtgca gacttacaac cagctgctga
2161 agccctccct gagtgagatt gagcttttca gggtcttctc attgtcctct gagttcaaga
2221 acatcacagt gagagaggtg gagaagctgg agctgcagaa gttgctggag agggtaccta
2281 tccctgtaaa ggagagcatt gaggaaccca gtgctaagat caacgttctt ctgcaagcct
2341 tcatctcaca gctgaaattg gagggctttg cactgatggc tgacatggtg tatgtcacac
2401 agtcggctgg ccggttgatg cgagcgatat tgaaattgtc ctgaaccgag gttgggcaca
2461 gcttacagac aagaccctga acctctgcaa gatgatcgac aaacgcatgt ggcagtccat
2521 gtgtcctctg cgcaagttcc ggaaactccc tgaggaagta gtgaagaaga ttgagaagaa
2581 gaatttcccc tttgagcgtc tgtacgacct gaatcataat gagattgggg agcttatccg
2641 catgccaaag atggggaaga ccatccacaa atatgtccat ctgtttccca agctggagtt
2701 gtcagtgcac ctgcagccta tcacacgctc caccctgaag gtggagctga ccatcacgcc
2761 agacttccag tgggatgaaa aggtgcatgg ttcatccgag gctttttgga ttctggtgga
2821 ggatgtggac agcgaggtga ttctgcacca tgagtatttt ctcctcaagg ccaagtacgc
2881 ccaggacgag cacctcatta cattcttcgt gcctgtcttt gaaccgctgc cccctcagta
2941 cttcatccga gtggtgtctg accgctggct ctcttgtgag acccagctgc ctgtctcctt
3001 ccggcacctg atcttgccgg agaagtaccc ccctccaacc gaacttttgg acctgcagcc
3061 cttgcccgtg tctgctctga gaaacagtgc ctttgagagt ctttaccaag ataaatttcc
3121 tttcttcaat cccatccaga cccaggtgtt taacactgta tacaacagtg acgacaacgt
3181 gtttgtgggg gcccccacgg gcagcgggaa gactatttgt gcagactttg ccatcctgcg
3241 aatgctgctg cagagctcgg aggggcgctg tgtgtacatc acccccatgg aggccctggc
3301 agagcaggta tacatggact ggtacgagaa gttccaggac aggctcaaca agaaggtggt
3361 actcctgata ggcgagacca gcacagacct gaagctgctg ggcaaaggga acattatcat
3421 cagcacccct gagaagtggg acatactttc ccggcgatgg aagcagcgca agaacgtgca
3481 gaacatcaac ctcttcgtgg tggatgaggt ccaccttatc gggggcgaga atgggcctgt
3541 cttagaagtg atctgctccc gaatgcgcta catctcctcc cagattgagc ggcccattcg
3601 cattgtggca ctcagctctt cgctctccaa tgccaaggat gtggcccact ggctgggctg
3661 cagtgccacc tccaccttca acttccatcc caatgtgcgt cccgtcccct tggagctgca
3721 catccagggc ttcaacatca gccatacaca aacccgcctg ctctccatgg ccaagcctgt
3781 gtaccatgct atcaccaagc actcgcccaa gaagcctgtc attgtctttg tgccgtctcg
3841 caagcagagc cgcctcactg ccattgacat cctcaccacc tgtgcagcag acatccaacg
3901 gcagaggttc ttgcactgca ccgagaagga tctgattccg tacctggaga agctaagtga
3961 cagcacgctc aaggaaacgc tgctaaatgg ggtgggctac ctgcatgagg ggctcagccc
4021 catggagcga cgcctggtgg agcagctctt cagctcaggg gttatccagg tggtggtggc
4081 ttctcggagt ctctgctggg gcatgaacgt ggctgcccac ctggtaatca tcatggatac
4141 ccagtactac aatggcaaga tccacgccta tgtggattac cccatctatg acgtgcttca
4201 gatggtgggc cacgccaacc gccctttgca ggacgatgag gggcgctgtg tcatcatgtg
4261 tcagggctcc aagaaggatt tctttaagaa gttcttatat gagccattgc cagtagaatc
4321 tcacctggac cactgtatgc atgaccactt caatgctgag atcgtcacca agaccattga
4381 gaacaagcag gatgctgtgg actacctcac ctggaccttt ctgtaccgcc gcatgacaca
4441 gaaccccaat tactacaacc tgcagggcat ctcccatcgt cacttgtcgg accacttgtc
4501 agagctggtg gagcagaccc tgagtgacct ggagcagtcc aagtgcatca gcatcgagga
4561 cgagatggac gtggcgcctc tgaacctagg catgatcgcc gcctactatt acatcaacta
4621 caccaccatt gagctcttca gcatgtccct caatgccaag accaaggtgc gagggcttat
4681 cgagatcatc tccaatgcag cagagtatga gaacattccc atccggcacc atgaagacaa
4741 tctcctgagg cagttggctc agaaggtccc ccacaagctg aataacccta agttcaatga
4801 tccgcacgtc aagaccaacc tgctcctgca ggctcacttg tctcgcatgc agctgagtgc
4861 tgagttgcag tcagatacgg aggaaatcct tagtaaggca atccggctca tccaggcctg
4921 cgtggatgtc ctttccagca atgggtggct cagccctgct ctggcagcta tggaactgcc
4981 ccagatggtc acccaagcca tgtggtccaa ggactcatac ctgaagcagc tgccacactt
5041 cacctctgag catatcaaac gttgcacaga caagggagtg gagagtgttt tcgacatcat
5101 ggagatggag gatgaagaac ggaacgcgtt gcttcagctg actgacagcc agattgcaga
5161 tgtggctcgc ttttgtaacc gctaccctaa tatcgaacta tcttatgagg tggtagataa
5221 ggacagcatc cgcagtggcg ggccagttgt ggtgctggtg cagctggagc gagaggagga
5281 agtcacaggc cctgtcattg cgcctctctt cccgcagaaa cgtgaagagg gctggtgggt
5341 ggtgattgga gatgccaagt ccaatagcct catctccatc aagaggctga ccttgcagca
5401 gaaggccaag gtgaagttgg actttgtggc cccagccact ggtgcccaca actacactct
5461 gtacttcatg agtgacgctt acatgggatg tgaccaggag tacaaattca gcgtggatgt
5521 taaagaagct gagacagaca gtgattcaga ttgagtcctg aggcatttac ttttgggtaa
5581 aggagagttg agcctgaatt aggaatgtgt acattgtagg aatcctggtt gtggggacca
5641 ggtctgtggg cctcaggtct ggccagccag ggctggtgct gtccccgcct acctccactt
5701 cctttccctt gctcactctg gatccagtga cagcaggtgt catgggtcaa gcataaatca
5761 tatatagcat tttcaggcat gttcctggta gttcttttga gtctgacatt ctaataaaat
5821 aatttgtaga aacc
//