LOCUS AK023201 2455 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ13139 fis, clone NT2RP3003203, moderately
similar to Rattus norvegicus golgi stacking protein homolog
GRASP55 mRNA.
ACCESSION AK023201
VERSION AK023201.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2455)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2455
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3003203"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000006475"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 101..1459
/codon_start=1
/protein_id="BAB14459.1"
/translation="MGSSQSVEIPGGGTEGYHVQRVQENSPGHRAGLEPFFDFIVSIN
GSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRF
CSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKP
LKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQ
MAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGV
PTVPLLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLP
ELVNPGLPPLPSMPPRNLPGIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSN
APSDPATTTAKADAASSLTVDVTPPTAKAPTTVEDRVGDSTPVSEKPVSAAVDANASE
SP"
BASE COUNT 637 a 623 c 542 g 653 t
ORIGIN
1 gtgccacgtc ccaagtgcta cgcggaggat tagagcaggc ggtgcgctgg gggcgggagc
61 agcgcggagc ccggctcggc cacaccgatc gcccgccgcc atgggctcct cgcaaagcgt
121 cgagatcccg ggcgggggca ccgagggcta ccacgttcag cgggtacaag aaaattcccc
181 aggacacaga gctggtttgg agcctttctt tgattttatt gtttctatta atggttcaag
241 attaaataaa gacaatgaca ctcttaagga tctgctgaaa gcaaacgttg aaaagcctgt
301 aaagatgctt atctatagca gcaaaacatt ggaactgcga gagacctcag tcacaccaag
361 taacctgtgg ggcggccagg gcttattggg agtgagcatt cgtttctgca gctttgatgg
421 ggcaaatgaa aatgtttggc atgtgctgga ggtggaatca aattctcctg cagcactggc
481 aggtcttaga ccacacagtg attatataat tggagcagat acagtcatga atgagtctga
541 agatctattc agccttatcg aaacacatga agcaaaacca ttgaaactgt atgtgtacaa
601 cacagacact gataactgtc gagaagtgat tattacacca aattctgcat ggggtggaga
661 aggcagccta ggatgtggca ttggatatgg ttatttgcat cgaataccta cacgcccatt
721 tgaggaagga aagaaaattt ctcttccagg acaaatggct ggtacaccta ttacacctct
781 taaagatggg tttacagagg tccagctgtc ctcagttaat cccccgtctt tgtcaccacc
841 aggaactaca ggaattgaac agagtctgac tggactttct attagctcaa ctccaccagc
901 tgtcagtagt gttctcagta caggtgtacc aacagtaccg ttattgccac cacaagtaaa
961 ccagtccctc acttctgtgc caccaatgaa tccagctact acattaccag gtctgatgcc
1021 tttaccagca ggactgccca acctccccaa cctcaacctc aacctcccag caccacacat
1081 catgccaggg gttggcttac cagaacttgt aaacccaggt ctgccacctc ttccttccat
1141 gcctccccga aacttacctg gcattgcacc tctccccctg ccatccgagt tcctcccgtc
1201 attccccttg gttccagaga gctcttctgc agcaagctca ggagagctgc tgtcttccct
1261 cccgcccacc agcaacgcac cctctgaccc tgccacaact actgcaaagg cagacgctgc
1321 ctcctcactc actgtggatg tgacgccccc cactgccaag gcccccacca ccgttgagga
1381 cagagtcggc gactccaccc cagtcagcga gaagcctgtt tctgcggctg tggatgccaa
1441 tgcttctgag tcaccttaac tttgaaccat tctttggaat tggcgtggta tatttaacca
1501 cgggagcgtg tctggaaacg caaactatca ttaatttcat actagtttgt accgtatctg
1561 taggcatcct gtaaataatt ccaaggggaa aactaaacga ggacgtgggt tgtatcctgc
1621 caggttgagt ggggctcaca cgctagggtg agatgtcaga aagcgcttgt attttaaaca
1681 accaaaaaga attgtaaggg tggcttgctg ccaggcttgc actgccgttc ctgggggtgt
1741 gcatcttcgg gaaaggtggt ggcggggcgt ccactaggtt tcctgtcccc tgctgctcct
1801 tccgtaagaa aatgaaatat tctatgccta atactcacac gcaacatttc ttgtactttg
1861 taagtcgttt gcgagaatgc agaccacctc actaaactgt aaacggtaaa gagattttta
1921 cttttggtct ccgtgagtcg catctctact aaggtttaca caggaattcc acctgaagac
1981 ttgtgttaaa gttctacagc gcgcactgtt aactgaacgt ctttttcttc agcctatacg
2041 cggatccttg ttttgagctc tcagaatcac tcagacaaca ttttgtaact gctgctgttg
2101 ctttctacat acaccttata aagtgacatt tcaaaagaaa taaggtgcca cagttttaaa
2161 ccagaaggtg gcactctgtg gctccttgta gtattatagc tatactggga aagcatagat
2221 acagcaataa agtacagtaa ttttactttt tttcttgtgt tacatctaaa ttacaaccct
2281 taattgccac gtgtgcactt actactctcc agtatgtctt attactctcc agtatgtcac
2341 gcatctttaa cttttcacgt cctatgtttg ctttctccca tttttaagag atggtaagtt
2401 aactggaatt gatttactga atgaaattaa atgcagatat ccctgttttt gaaat
//