LOCUS AK023170 2295 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ13108 fis, clone NT2RP3002529, weakly similar
to VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS45.
ACCESSION AK023170
VERSION AK023170.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2295)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2295
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3002529"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000006444"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 53..1765
/codon_start=1
/protein_id="BAB14443.1"
/translation="MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEI
LQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVI
SKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQ
GLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDR
CDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNM
YLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTV
VGELSRLVSERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYA
LHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITK
QFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIG
GATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRS
ASRR"
BASE COUNT 680 a 480 c 524 g 611 t
ORIGIN
1 tagccagaaa agggggcggg aagggctgta gggtacttgt caattcgccg ccatgaacgt
61 ggtttttgct gtgaagcagt acatttccaa aatgatagag gacagcgggc ctggtatgaa
121 agtacttctc atggataaag agacgactgg catagtgagt atggtataca cacaatcgga
181 gattctacag aaggaagtgt acctctttga acgcattgat tctcaaaatc gagagatcat
241 gaaacacctg aaggcaattt gttttcttcg acctacaaag gagaatgtgg attatattat
301 tcaggagctc cgaagaccca aatacactat atatttcatt tatttcagta atgtgatcag
361 caagagtgac gtgaagtcat tggctgaagc tgatgaacag gaagttgtgg ctgaggttca
421 ggaattttat ggtgattaca ttgctgtgaa cccacatttg ttttccctca atattttggg
481 ttgctgccag ggtcgaaatt gggatccagc ccagctatct agaacaactc aagggcttac
541 agctctcctt ttatctctga agaagtgtcc catgattcgt tatcagctct catcagaggc
601 agcaaagaga cttgcagagt gcgttaagca agtgataact aaagaatatg aactgtttga
661 attccgtcgg acagaggttc ctccattgct ccttatttta gatcgctgtg atgatgccat
721 caccccattg ctaaaccagt ggacatatca ggccatggtc cacgaactac taggcataaa
781 caacaatcgg attgatcttt ccagagtgcc gggaatcagt aaagacttaa gagaagtggt
841 cctatctgct gaaaatgatg aattctatgc taataatatg tacctgaact ttgctgagat
901 tggtagcaat ataaagaatc tcatggaaga ttttcagaag aagaaaccaa aagaacagca
961 aaaactagaa tcaatagcag acatgaaggc gtttgttgag aattatccac agttcaagaa
1021 aatgtctggg actgtttcaa agcatgtgac agtggttgga gaactgtctc gattggtcag
1081 tgaacggaat ctgctggagg tttcagaggt tgagcaagaa ctggcctgtc aaaatgacca
1141 ttctagtgct ctccagaata taaaaaggct tctgcagaac cccaaagtga cagagtttga
1201 tgctgcccgc ctggtgatgc tttatgcttt acattatgag cgacacagca gcaatagcct
1261 gccaggacta atgatggacc tcaggaataa aggtgtttct gagaagtatc gaaagctcgt
1321 gtctgcagtt gttgaatatg gtggtaaacg agtcagagga agtgacctct tcagccccaa
1381 agatgctgtg gctatcacca aacaattcct caaaggactg aagggagtag aaaatgtata
1441 tacacagcat caacctttcc tacatgaaac cctggatcat ctcatcaaag gaaggcttaa
1501 ggaaaaccta tatccttatt taggccccag cacactcaga gacagacctc aggatatcat
1561 tgtgtttgta attggaggag ccacctatga agaggctcta acagtttata acctgaaccg
1621 caccactcct ggagtgagga ttgtcctggg aggcaccaca gtgcacaaca cgaaaagttt
1681 cctagaggaa gttctggctt ctggactgca cagccgaagc aaggagagct ctcaagtcac
1741 atcaaggtca gcgagcagaa gatgaaacgg tggttggggg aagggcacag cttcctctct
1801 tgtccccact acaggttttc cctactaaac aaaggtgttg gagagcagct ttgggttctg
1861 tgctggttgt tagaactcat ctccaggtag cccacggata cgtggttggc acagacacaa
1921 gactcccaga gttgtcctaa caataagtct gagcccatct caacccactt ttctccggta
1981 gtctttatgt atctgttagc acaatcactt cagttactga tgaattttgt tgggatctga
2041 cttggggaaa gggttatcag agcctagagg ggcttaaaaa gtaatcattt gatgtacata
2101 ccacactcct tggcttcctt tctcttccct taaccctttc tgcttttcat taaccacatt
2161 cctgcacaac tcatttctga aaacctacca tgtttcttta cagagccatc caaaaatttt
2221 ttgtccctac atagcaattt tctgtggcac tgagaaacca tgtatgacca caataaaaat
2281 ccattttgtg aaagg
//