LOCUS AK023016 2977 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar
to PARAMYOSIN.
ACCESSION AK023016
VERSION AK023016.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2977)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2977
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2005491"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006290"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 114..2192
/codon_start=1
/protein_id="BAB14359.1"
/translation="MSDSGTGLTYWKLEEKDMHHSLPETLEKTFISLSSTDVSPNQSN
TSNEMKLPSLKDIYYKKQRENKQLPERNLTSASNPNHPPEVLTLDPTLHMKPKQQISG
IQPHGLPNALDDRISFSPDSVLEPSMSSPSDIDSFSQASNVTSQLPGFPKYPSHTKAS
PVDSWKNQTFQNESRTSSTFPSVYTITSNDISVNTVDEENTVMVASASVSQSQLPGTA
NSVPECISLTSLEDPVILSKIRQNLKEKHARHIADLRAYYESEINSLKQKLEAKEISG
VEDWKITNQILVDRCGQLDSALHEATSRVRTLENKNNLLEIEVNDLRERFSAASSASK
ILQERIEEMRTSSKEKDNTIIRLKSRLQDLEEAFENAYKLSDDKEAQLKQENKMFQDL
LGEYESLGKEHRRVKDALNTTENKLLDAYTQISDLKRMISKLEAQVKQVEHENMLSLR
HNSRIHVRPSRANTLATSDVSRRKWLIPGAEYSIFTGQPLDTQDSNVDNQLEETCSLG
HRSPLEKDSSPGSSSTSLLIKKQRETSDTPIMRALKELDEGKIFKNWGTQTEKEDTSN
INPRQTETSVNASRSPEKCAQQRQERLNSASQRSSSLPPSNRKSSTPTKREIMLTPVT
VAYSPKRSPKENLSPGFSHLLSKNESSPIRFDILLDDLDTVPVSTLQRTNPRKQLQFL
PLDDSEEKTY"
BASE COUNT 1028 a 588 c 570 g 791 t
ORIGIN
1 aacaaggaaa tgagcaaagt aagaagacac caattgagaa atctgatttt gctgctgcta
61 cacatcctcg tgctttttac ctcagtaaac cagatgaaac tccaaatgct tggatgtctg
121 attcaggaac aggattgact tactggaaac tagaggaaaa ggatatgcac cactctttgc
181 ctgaaacttt agagaagacg ttcatatcat tgtcttccac agatgtgtca ccaaaccagt
241 ctaatactag taatgagatg aagctaccgt cactgaagga tatttattat aaaaaacaaa
301 gggaaaacaa gcagttacct gagaggaatc tcacttctgc ttccaaccca aatcatccac
361 cagaggtcct gactctagat cctacgttac acatgaagcc aaagcagcag atttcaggga
421 ttcaacctca cggccttccg aatgcccttg atgacagaat atccttttcc ccggactctg
481 ttctagagcc tagtatgtct agtccctctg acatagactc attttcacaa gcaagtaatg
541 tcacttctca gttacctgga tttccaaaat atccctcaca cacaaaagct tctccggtgg
601 actcttggaa aaatcagaca ttccaaaacg aaagtaggac cagttccacg tttccgtcag
661 tatataccat tactagtaat gatatctcgg tcaacactgt agatgaagaa aacactgtca
721 tggttgcttc ggcctcagtc agtcagtccc agcttccagg tacagccaac agtgtcccag
781 aatgcatttc attgacttcc ttggaagatc ctgtgatatt gtctaagatt aggcagaatc
841 tgaaggaaaa gcatgctcga cacatagcag atcttcgagc ttattatgaa tcagaaataa
901 atagtttgaa acagaagctg gaggcaaaag aaatctctgg agttgaagat tggaagataa
961 ccaatcaaat tcttgtagac agatgtggcc aattagatag tgctttgcat gaagctacta
1021 gtcgcgtgag aacacttgaa aataagaata acttactgga aattgaagtg aatgatttga
1081 gagaacgctt cagtgcagcc agcagtgctt ccaaaatttt gcaggaacga attgaagaaa
1141 tgagaacaag cagtaaagaa aaagacaata ccatcattcg actaaaatct agactgcaag
1201 atttagaaga agcatttgag aatgcttaca aactctcaga tgataaagaa gctcaactaa
1261 aacaagagaa caaaatgttt caagatcttt taggagagta tgagtccctt ggaaaagaac
1321 acaggagagt aaaggatgca ttaaatacaa ctgagaataa attgcttgat gcatatactc
1381 agatttctga tttgaaaaga atgatttcaa aacttgaagc tcaggtcaag caagtagaac
1441 atgaaaatat gttaagcctt cgtcataatt ctagaattca cgtgagaccc tcgcgtgcca
1501 acacactagc aacttcagac gtcagcaggc ggaaatggct gattccaggt gcagagtatt
1561 ccatctttac tggccagcct ctggacaccc aggacagtaa cgtggataac cagctggagg
1621 aaacctgtag cctagggcac cgttcacctc tggaaaagga ttcttcacct ggaagttcat
1681 caacaagctt gttgataaaa aagcaaagag agacttcaga cacgccgatc atgagagctt
1741 taaaagaact tgatgaggga aaaatattta aaaattgggg gacacagaca gagaaagagg
1801 acacctcaaa tataaatcct cggcaaactg aaacttcagt taatgcaagt cgttctccag
1861 aaaagtgtgc ccaacagaga caagagagac ttaattcggc ctcacagaga tcatcatctt
1921 taccaccttc aaatcgtaaa tcaagtactc caacaaaaag agagattatg ctaacaccag
1981 tgactgtggc ttatagtcca aagcgatccc ctaaagaaaa cttgtcccca ggatttagtc
2041 atctgcttag caaaaatgag agcagtccaa ttcgatttga tatacttttg gatgatttag
2101 atactgttcc tgtgtctaca ttacaacgta ccaatccaag aaagcaactc cagtttcttc
2161 ctctagatga ctcggaagaa aaaacttatt aatcatagct cttgccctga accggtgcca
2221 aatggagtga agaaagtatc tgtgagaaca gcctgggaga agaataaatc agttagctat
2281 gaacagtgta agccggtttc agtcactcca caggggaatg attttgaata tacagcaaaa
2341 attcggaccc tagctgaaac agaacgattt tttgatgaac ttacaaaaga aaaggaccag
2401 attgaggcag cgctaagcag gatgccttct cctggaggac gaatcacttt acagacaaga
2461 ttaaatcagg aagccttgga agatcgtttg gaaaggatta atcgagaact gggttcagtt
2521 cgcatgacgc taaagaaatt ccatgttttg cgcacctctg caaatctttg agatttgtag
2581 ccattaaatt ttgagacatt tttgtttgca ctaatgtata attatgcagt cagaaaaggc
2641 aaactatttt gtactgttta taagccttca aacagtagtt ttacaatcat gctattctta
2701 cacttgctat tttatacttc aaatagccac atattttcaa gatatttttg ttatgctcag
2761 gaatctcttg tatattttac tatttaaaaa gcattatttt taaatagtat ctgtctccaa
2821 tttatatcaa gaataaggaa atataaacag aggaagcagc ttgtttctaa acaaatagtg
2881 ttatcctttt acaattaact gcacatcaat tttatagact tgttctacat tgtaaataca
2941 attcagtttt taaaaaataa agcttaatag cttccat
//