LOCUS AK022919 2416 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ12857 fis, clone NT2RP2003513, highly similar
to Homo sapiens paralemmin (PALM), transcript variant 2, mRNA.
ACCESSION AK022919
VERSION AK022919.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2416)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2416
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2003513"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006193"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 90..902
/codon_start=1
/note="highly similar to Homo sapiens paralemmin (PALM),
transcript variant 2, mRNA"
/protein_id="BAG51135.1"
/translation="MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPAAAKENAAAPSP
VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGT
AENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQ
AQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAA
EPKEPAPPNGSAAEPPTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM"
BASE COUNT 442 a 838 c 772 g 364 t
ORIGIN
1 acctgaagtc caaggcactg cgggagcgct ggctgctgga ggggacgccg tcctcggcct
61 cagaggggga tgaggacctg aggaggcaga tgcaggacga cgagcagaag acacggctgc
121 tggaggactc ggtgtccagg ttggagaagg aaattgaggt gctggagcgt ggagactccg
181 ccccagccgc tgccaaggag aacgcggcgg ccccgagccc agtccgggcc ccagccccga
241 gtccagccaa ggaggagcgc aagacagagg tggtgatgaa ttcacagcag acgccggtgg
301 gcacgcccaa agacaagcga gtctccaaca cgcccctgag gacggttgac ggctccccca
361 tgatgaaggc agtggtccat gctgtggacg gcaccgccga gaacgggatc caccccctga
421 gctcctccga ggtggacgaa ctcatccaca aagcggacga ggtcacgctg agcgaggcag
481 ggtccacggc cggggcggca gagacccggg gggctgtgga gggggcagcc cggaccacgc
541 cctcccggcg ggagatcacc ggtgtgcagg cacagccagg cgaggccacg tccggcccgc
601 cggggatcca gcccggccag gagcccccgg tcacaatgat cttcatgggt taccagaacg
661 tggaggatga ggccgagacc aagaaggtgc tgggccttca agataccatc acggcggagc
721 tggtggtcat cgaagacgcg gctgagccca aggagcctgc accacccaac ggcagtgctg
781 ccgagcctcc cacggaggcc gcctccaggg aagagaatca ggcggggccc gaggccacca
841 ccagcgaccc ccaggacctc gacatgaaga agcaccgttg taaatgctgc tccatcatgt
901 gagccggccc ccgagacccc ggcccccacc ccacaccaca gacacccacc agcccggccc
961 ctcccggcgc ctgcccaccc tccacccaca gcctcacggg tccaggactt ggcgtgttgt
1021 tacatgttcc ttccgagttt tctttcgctg gaaagaggga caggggcccc cacccgtcac
1081 cacgccccaa cactcccccc gaaccagagc cgtgcacttg tgcctggtag gagagagaca
1141 ggacagaccc gcttttcccg agacaaggac cccccatgtc acggcagctt cacagacgcg
1201 gctcgcgccc accggggtcc tggcgggtgg gacccgcggc ctccacgcgg cccaggccag
1261 cctgccaccc tctgggcctc ctacctgtgc ctttctctga ggggacaccc cgccagagag
1321 ggccccggga gccgggggtg ggtactgagg cctgctcagg ccctggaagt gaggctctat
1381 ggggttccct ggccaaggcg ctggcccccc aatctcaggc agttggggtg aggccgtgcc
1441 tctttggggg ctaaaggtct tgggtggagg acaggcccct ctgctgtgcc cctatgccct
1501 gtgtgggccc aaccagtgga caatggagtc tgggggaggg ggaaccccgg ggacatgccc
1561 tcacccggga ggggccggta acccctgggc tatcttctag acggggcgaa ccaggggtca
1621 ttgacctgcc ccctgcacag ggcagggacc gagtgagcca ctccttgtcc cgagctcccg
1681 cccccactgg gccctcctcc ctcctggtgc taatttgggg accccagggg ccgcccccgg
1741 cctcttctcc atcctgcttg gaccagggtc ctgggtcttc ccaaccatac cccgagatca
1801 ggccccacct gccagctcta ctgggcttgg agcacgtccg ggcagtggag ggagggacac
1861 agcctgggac aggaagcctc ttgggttgga gcaggagacc ctcatttgcc acccagacca
1921 atgtgagcct gcccccagcc ccctctcatt ggaagtggca aggggcttcc ctcctggggg
1981 cagctacact cgtccccaga ggcacattcg tgcacattct cacagacacc gtctcacacg
2041 ttggctttgg acaaccaggc cccaacttgg tccctgccct agggacctcc agcctggtgc
2101 ccagtgctca ggccacctcc tggtccagtc accacctgca gcctcggcag ggcaggtaca
2161 ggggccacct cggatgggag cctgggtccc tgcctccgct ctgcccctgg gtggctggga
2221 ggagaggccc tctcgggggt gacctgggcg tcagccgtgg aaccccctcc tcctccctgg
2281 agtctgcctg agtccctcga gccgcgagcc ttcgctgaag tgcccttgct ataaccccct
2341 ctgcttctgg tgtgtgacga ggcccccgat gttcttggtt ttcccagaga agcaaataaa
2401 cagcgtgaac agcccc
//