LOCUS AK022845 3375 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ12783 fis, clone NT2RP2001876, moderately
similar to ALLOGRAFT INFLAMMATORY FACTOR-1.
ACCESSION AK022845
VERSION AK022845.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3375)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3375
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2001876"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006119"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 100..552
/codon_start=1
/protein_id="BAB14269.1"
/translation="MSGELSNRFQGGKAFGLLKARQERRLAEINRELLCDQKYSDEEN
LPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDT
ISYRDFVNMMLGKRSAVLKLVMMFEGKANESSPKPVGPPPERDIASLP"
BASE COUNT 788 a 879 c 900 g 808 t
ORIGIN
1 acacgcagct agccggagcc cggaccaggc gcctgtgcct cctcctcgtc cctcgccgcg
61 tccgcgaagc ctggagccgg cgggagcccc gcgctcgcca tgtcgggcga gctcagcaac
121 aggttccaag gagggaaggc gttcggcttg ctcaaagccc ggcaggagag gaggctggcc
181 gagatcaacc gggagcttct gtgtgaccag aagtacagtg atgaagagaa ccttccagaa
241 aagctcacag ccttcaaaga gaagtacatg gagtttgacc tgaacaatga aggcgagatt
301 gacctgatgt ctttaaagag gatgatggag aagcttggtg tccccaagac ccacctggag
361 atgaagaaga tgatctcaga ggtgacagga ggggtcagtg acactatatc ctaccgagac
421 tttgtgaaca tgatgctggg gaaacggtcg gctgtcctca agttagtcat gatgtttgaa
481 ggaaaagcca acgagagcag ccccaagcca gttggccccc ctccagagag agacattgct
541 agcctgccct gaggaccccg cctggactcc ccagccttcc caccccatac ctccctcccg
601 atcttgctgc ccttcttgac acactgtgat ctctctctct ctcatttgtt tggtcattga
661 gggtttgttt gtgttttcat caatgtcttt gtaaagcaca aattatctgc cttaaagggg
721 ctctgggtcg gggaatcctg agccttgggt cccctccctc tcttcttccc tccttccccg
781 ctccctgtgc agaagggctg atatcaaacc aaaaactaga gggggcaggg ccagggcagg
841 gaggcttcca gcctgtgttc ccctcacttg gaggaaccag cactctccat cctttcagaa
901 agtctccaag ccaagttcag gctcactgac ctggctctga cgaggacccc aggccactct
961 gagaagacct tggagtaggg acaaggctgc agggcctctt tcgggtttcc ttggacagtg
1021 ccatggttcc agtgctctgg tgtcacccag gacacagcca ctcggggccc cgctgcccca
1081 gctgatcccc actcattcca cacctcttct catcctcagt gatgtgaagg tgggaaggaa
1141 aggagcttgg cattgggagc ccttcaagaa ggtaccagaa ggaaccctcc agtcctgctc
1201 tctggccaca cctgtgcagg cagctgagag gcagcgtgca gccctactgt cccttactgg
1261 ggcagcagag ggcttcggag gcagaagtga ggcctggggt ttggggggaa aggtcagctc
1321 agtgctgttc caccttttag ggaggatact gaggggacca ggatgggaga atgaggagta
1381 aaatgctcac ggcaaagtca gcagcactgg taagccaaga ctgagaaata caaggttgct
1441 tgtctgaccc caatctgctt gaaacctgac tctgcttctc tcatttgtct tcctacccta
1501 ctcacataat tcactcattg actcactcat tcaccagata tttattgacc tgctattata
1561 agctatacat cctcccatgt tgtcctggca tgtgcagtat acacggtcta actcatctct
1621 ccccagatct ctcagaacct tgagcttggg aattgaactg gggtcacctg tgtcctttct
1681 tatggactcg caggatttta gaaccctaat gcaccctgga gggtagctgg gccagacttc
1741 tcatttcaca ggtgaggaga ctggtgcccc acagggatta agtgccttgc ccaaggtcag
1801 gcttatctcc agagggaggt gccctggact ggggcccaga tgttcaggga ccctgcctac
1861 acctcatttc cagtgtgggc tgccttagtt agttatgaga acagggaagg gctgggaaga
1921 gacagcctcc aaggtcaaca cttggagagg gtttcacttg ctctgaagac cctggtccag
1981 gattcgccct ctcccatgcc ttcaagtcag catcaggctt agggcaaaga ccaggcctct
2041 gaagctgcct cttgtaattc atgcaggaag atgtcaaagt cagccccatc ttggctgatc
2101 agggtgttca gccttaaccc cacctgtgtt ctgaagtctc ttaccctacc tgctcaggac
2161 tgagacagtt attcactgaa catatttatt aagcacttgc tgtaggccaa cagttaagaa
2221 tccaataatg aaatggacag attcatggaa cttagagtcc aataggaaag tgagacccag
2281 acaatgacaa tgagataaat gttaggaagg gggaggtatg gggtgacttc cctgcagtcc
2341 tgggggccta gatgggccca agactgggtg agagtcttgg cagagccttt gcaacacctt
2401 aagtggacag gactgggagg tcttggtggt tggagccaac gtgggttccc tgcggctcct
2461 tagtcacctc tgatagcaga ttgagggagg aaaacaggta aggcatgagg aaatggccag
2521 gttgggttaa cccactggtt tcaaccagtt caggaatgag gttatttggc catgactggc
2581 tgatcttgag ctcaaggatc tgcttcaaat gcacacaggc ctagttgaag tttaaacccc
2641 agcaaaacat tcctccctgt aaatggaaaa tcctacttct acccccaccc tgccctgttt
2701 tttgtttttt ttttccccaa gatcatcaga tgtcctcacc cctcctcact gcctctcctc
2761 tctgggacag gctgggacct ttgaggaaga taaagccttc cttgactacc catcatattc
2821 agtgtccctg ttcctcactc agagaggaag gcagaaccag tcaggcttat ttcagtaagt
2881 tccacagttc tacaagactg caggaattct ccttaaggga ggagagcaag caggtgtggc
2941 cccagcttct ggaaatggca gaagagaggg ttttctcatt gaatgggggt gggggctcgt
3001 gtgtcctggg aaaccccatc agtcccttca tttcttgaga ctcaactcct gggaggagag
3061 ggtctcaaga gttgtccctg gaaggagggc gggggcagtc tacatctatt tcaggttgtg
3121 gctcttggtt ctaggactct tacttctctg gctaagggct cagcttcttg ggacttcaac
3181 catcttcttt ctgaaagacc aaatctaatg taaccagtaa cgtgaggact gccaagtatg
3241 gctttgtccc tatgactcag aggagggttt gtcgggcaaa ttcaggtgga tgaagtatgt
3301 gtgtgcgtgt gcatgggagt gtgcgtggac tgggatatca tctctacagc ctgcaaataa
3361 accagacaaa cttac
//