LOCUS AK022828 2509 bp mRNA linear HUM 12-JUL-2008
DEFINITION Homo sapiens cDNA FLJ12766 fis, clone NT2RP2001520, highly similar
to Calcium-binding mitochondrial carrier protein Aralar1.
ACCESSION AK022828
VERSION AK022828.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2509)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2509
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2001520"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006102"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 31..2067
/codon_start=1
/note="highly similar to Calcium-binding mitochondrial
carrier protein Aralar1"
/protein_id="BAG51120.1"
/translation="MAVKVQTTKRGDPHELRNIFLQYASTEVDGERYMTPEDFVQRYL
GLYNDPNSNPKIVQLLAGVADQTKDGLISYQEFLAFESVLCAPDSMFIVAFQLFDKSG
NGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYTEFTQFLQELQLE
HARQAFALKDKSKSGMISGLDFSDIMVTIRSHMLTPFVEENLVSAAGGSISHQVSFSY
FNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKEEFAQSAIRYGQVTPLEIDILYQLAD
LYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLGRPIWLQIAESAYRFTLGS
VAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGL
IPQLIGVAPEKSIKLTVNDFVRDKFTRRDGSVPLPAEVLAGGCAGGSQVIFTNPLEIV
KIRLQVAGEITTGPRVSALNVLRDLGIFGLYKGAKACFLRDIPFSAIYFPVYAHCKLL
LADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTTYSGVIDCFRK
ILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRWFYIDFGGLKPAGSEPTPKSR
IADLPPANPDHIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQPKAAVAATQ"
BASE COUNT 664 a 543 c 594 g 708 t
ORIGIN
1 actcgctcgt ccccggcttc cgggcacagc atggcggtca aggtgcagac aactaagcga
61 ggggatcctc atgagttaag aaacatattt ctacagtatg ccagtactga ggttgatgga
121 gagcgttaca tgaccccaga agactttgtt cagcgctatc ttggactgta taatgatcca
181 aatagtaacc caaagatcgt gcagctcttg gcaggagtag ctgatcaaac caaggatggg
241 ttgatctcct atcaagagtt tttggcattt gaatctgttt tatgtgctcc agattccatg
301 ttcatagtgg ctttccagtt gtttgacaag agtggaaatg gagaggtgac atttgaaaat
361 gtcaaagaaa tttttggaca gactattatt catcatcata tcccttttaa ctgggattgt
421 gaatttatcc gactgcattt tgggcataac cggaagaagc atcttaacta cacagaattc
481 acgcagtttc tccaggagct gcaattggaa catgcaagac aagcctttgc actcaaagac
541 aaaagcaaaa gtggcatgat ttctggtctg gatttcagtg acatcatggt taccattaga
601 tctcacatgc ttactccttt tgtggaggag aacttagttt cagcagctgg aggaagtatc
661 tcacaccagg ttagcttctc ctacttcaat gcatttaact cgttactgaa taacatggag
721 cttgttcgta agatatatag cactctagct ggcacaagga aagatgttga agtcacaaag
781 gaggaatttg cccagagtgc catacgctat ggacaagtca caccactaga aattgatatt
841 ctatatcagc ttgcagactt atataatgct tcagggcgct tgactttggc agatattgag
901 agaatagccc cattggctga gggggcctta ccttacaacc tggcagaact tcagagacag
961 cagtctcctg ggttaggcag gcctatctgg ctccagattg ccgagtctgc ttacagattc
1021 actctgggct cagttgctgg agctgtggga gccactgcag tgtatcctat agatctggtg
1081 aagacccgaa tgcaaaacca gcgtggctct ggctctgttg ttggggagct aatgtacaaa
1141 aacagctttg actgttttaa gaaagtcttg cgttatgagg gcttctttgg actctacagg
1201 ggtctgatac cacaacttat aggggttgct ccagaaaagt ccattaaact gactgttaat
1261 gattttgttc gggacaaatt taccagaaga gatggctctg ttccacttcc agcagaagtt
1321 cttgctggag gctgtgctgg aggctctcag gtcattttta ccaacccatt ggagatagtg
1381 aagattcgtc tgcaagtagc tggagagatc accacgggac ccagagtcag cgccctgaat
1441 gtgctccggg acttgggaat ttttggtctg tataagggtg ccaaagcgtg tttcctccga
1501 gacattccct tctctgcaat ctattttcct gtttatgctc attgcaaact acttctggct
1561 gatgaaaatg gacacgtggg aggtttaaat cttcttgcag ctggagccat ggcaggtgtc
1621 ccagctgcat ctctggtgac ccctgctgat gtcatcaaga caagactgca ggtggctgcc
1681 cgcgctggcc agacgacata cagtggtgtc atcgactgtt tcaggaagat tctccgggaa
1741 gaagggccct cagcattttg gaaagggact gcagctcgag tgtttcgatc ctctccccag
1801 tttggtgtta ccttggtcac ttatgaactt ctccagcggt ggttttacat tgattttgga
1861 ggcctcaaac ccgctggttc agaaccaaca cctaagtcac gcattgcaga ccttcctcct
1921 gccaaccctg atcacatcgg tggatacaga ctcgccacag ccacgtttgc aggcatcgaa
1981 aacaaatttg gcctttatct cccgaaattt aagtctccta gtgttgctgt ggttcagcca
2041 aaggcagcag tggcagccac tcagtgatga gacaactgtt gagtgtggca aaatggcgcc
2101 ttgaagaaag aggcctagga gagcagccct gtaatgtatc cagtcagctg catggtactg
2161 actgagctga ggagtcaaac tcttctttct gtatgacata tacatatact tgtttataaa
2221 ataatcattt gcccagggaa aaaaccacaa cgctgtttca agctttagtc ttatgtgttg
2281 aaatgttttt gtaagccttg gcatgaatta gtgttctaga ctctgctttg cacagcttgc
2341 acttacagtg attgtacata ttgtacatct ttgtacagag acatcttggc acctcatccc
2401 aacaaatcac atttgtagaa atgtaatgcg gttctgagtg gcttgaaatg tacagaatgt
2461 tttgaaagtg ttttattaag aatcacacaa aaataaatgt attaaaatt
//