LOCUS AK022788 4225 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ12726 fis, clone NT2RP2000001, highly similar
to PHD finger protein 8.
ACCESSION AK022788
VERSION AK022788.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4225)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..4225
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2000001"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006062"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 108..1748
/codon_start=1
/note="highly similar to PHD finger protein 8"
/protein_id="BAG51116.1"
/translation="MSRLSLPSKNGSKKKGLKPKELFKKAERKGKESSALGPAGQLSY
NLMDTYSHQALKTGSFQKAKFNITGACLNDSDDDSPDLDLDGNESPLALLMSNGSTKR
VKSLSKSRRTKIAKKVDKARLMAEQVMEDEFDLDSDDELQIDERLGKEKATLIIRPKF
PRKLPRAKPCSDPNRVREPGEVEFDIEEDYTTDEDMVEGVEGKLGNGSGAGGILDLLK
ASRQVGGPDYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRS
SGSSSSGLGTVSNSPASQRTPGKRPIKRPAYWRTESEEEEENASLDEQDSLGACFKDA
EYIYPSLESDDDDPALKSRPKKKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIE
TGLAAAAAKLAQQELQKAQKKKYIKKKPLLKEVEQPRPQDSNLSLTVPAPTVAATPQL
VTSSSPLPPPEPKQEALSGSLADHEYTARPNAFGMAQANRSTTPMAPGVFLTQRRPSV
GSQSNQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL"
BASE COUNT 992 a 1168 c 1028 g 1037 t
ORIGIN
1 tcttccaaca gaacgttggg aagacgagca atatctttgg gctgcagagg atcttcccag
61 ccggctccat tcccctaacc aggccagccc attccacttc agtgtccatg tccaggctgt
121 cactgccctc caaaaatggt tcaaagaaga aaggcctgaa gcccaaggaa ctcttcaaga
181 aggcagagcg aaagggcaag gagagttcag ccttggggcc tgctggccag ttgagctata
241 atctcatgga cacatacagt catcaggcac tgaagacagg ctctttccag aaagcaaagt
301 tcaacatcac tggtgcctgc ttgaatgact cagatgacga ctcaccagac ttggaccttg
361 atggaaatga gagcccattg gccctattga tgtctaacgg cagtacgaaa agggtgaaga
421 gtttatccaa atctcggcga accaagatag caaagaaggt agacaaggct aggctgatgg
481 cagaacaggt gatggaagac gaatttgact tggattcaga tgatgagctg cagattgacg
541 agagattggg aaaggagaag gcgaccctga taataagacc aaaatttccc cggaaattgc
601 cccgtgcgaa gccttgctct gaccccaacc gagttcgtga accaggagaa gttgagtttg
661 acattgagga ggactataca acagatgagg acatggtgga aggggttgaa ggcaagcttg
721 ggaatggtag tggcgctggt ggcattcttg atctgctcaa ggccagcagg caggtggggg
781 gacctgacta tgctgccctc accgaggccc cagcttctcc cagcactcag gaggccatcc
841 agggcatgct gtgcatggcc aacctgcagt cctcatcgtc ctcaccggct acctctagcc
901 tgcaggcctg gtggactggg ggacaggatc gaagcagtgg gagctccagc agtgggctgg
961 gcacagtgtc taacagtcct gcttcccagc gcaccccagg gaagcggccc atcaagcggc
1021 cagcatactg gagaaccgag agcgaggagg aggaggagaa cgccagtctg gatgaacagg
1081 acagcttggg agcgtgcttc aaggatgcag agtatatcta tccttcactg gagtctgatg
1141 atgatgaccc tgctttgaaa tctcgaccca agaaaaagaa gaattcagat gatgctccat
1201 ggagtcctaa agcccgcgtg accccaactc tgccgaagca ggaccgtcct gtgcgtgagg
1261 ggacccgggt agcctctatt gagacaggtt tggctgcagc agctgcaaag ctggcccagc
1321 aggagctaca gaaggcccaa aagaagaaat atatcaagaa gaagcctttg ctgaaggagg
1381 tagaacagcc tcgccctcaa gactccaatc tcagtctgac agtaccagcc cccactgtgg
1441 ctgccacacc acaacttgtc acctcctcct cacccctgcc tcctcctgag cctaaacaag
1501 aggccctgtc aggaagtctc gctgaccatg agtacaccgc tcgtcccaat gcctttggca
1561 tggcccaggc aaaccgcagc accacaccta tggcccccgg tgtcttcttg acccagcggc
1621 gcccttcagt tggctcccag agcaatcagg caggacaagg aaagcgtccc aaaaagggcc
1681 tggccacagc aaagcagaga ctcggccgta tcctgaaaat ccacagaaat ggcaaactac
1741 ttctgtgagc cctcctgtgt cccacccctc acccctttac ccccattgcc ttctccattg
1801 tcaactcttg gggcactcct ggatcctatc tgccctggac caggtgctga ggtgcattgt
1861 cctgctttct tgggacttac caaaggcacg gacccctcca ccgactcctt ctagttccct
1921 tccccacttt cactagagca tcctgcctgc cttctccact gaggagcagg taaatgggag
1981 aggtttccag ctgactagaa ccctcctttc tactcgtcca aaccactccc gtcacctgcc
2041 ttgtctgttc tttattcttc atcccccgct agagctggaa ggcaggatga ggagaggtat
2101 gaaggagcct gagccatgaa gtgggaagcc cagtgcttga cactttctgc aactctagcc
2161 ctatatccag aagcctgccc acctccaccc attctgtttg ccccatttcc ccagtccagt
2221 ggacatgccc cacctccaga cttgctcatg ggagaaggct gtggtctctg ccccctcttg
2281 ccaaatgctt catggaaatg aagaggaagg cctagagcct ccttcctgcc ccactgtggg
2341 ccatttccgg aagtggccta gaaatgccaa cttcacttac ctttcaaaag aaaggtgatt
2401 cctatcactt gtcaaggtag ggagaggtca gatgcccaag cctttgacca cggttttgta
2461 gcctgttgga ggaagctact tttagctggc tacacatgag gccacttgtt ttagggtgag
2521 ctccagggat ttgcctggat tttgaaatca tgtagaacat tatccacgtg gctgtggctg
2581 tggctgtggc tgggccctgg caggtggaaa accatctccc agaaacctga aagcacctgc
2641 caatgacgca gataaccctg gccctacagc ctgcttgctc cgcctatacc acagagcaca
2701 gcctggacat tatggagggt gtggcgggac ggcccacacc tgggtcctcc atcgggaact
2761 tttcatgctt ctttctccac ctgaggtctt ggtctgaaga agacctcagg actcacatct
2821 tcactcctgg gcctttgcac ttccagacga caggtcatcg ttcaagcaga atgcagacag
2881 gccattcacg agcccaagtt gaagagaaga gacgcccatc cgtgaaggag cagaccatcc
2941 atccgatcct ccccttcccc tgtccttcct tcgtggattg tctccattgt ccagacagtg
3001 ccccccacct cccaccgcct tgcctcactg gcaatctgga ctcgatggag aacatccccc
3061 cacctccatt tggcactacc caagtggagt gtacccttgc cctttccacc tgtaccaccc
3121 actccaacct caccccagct tgcccaatgc ttctggggaa tttaatagct accatgcagg
3181 ccacagggaa tttgtgaggc ttcttttgtc atctttgtat ctccagtttg tctttctttt
3241 ctccatagcc ctgcctctac tttccttcct tggaatcagg ggttccttta gcccatttgc
3301 tttctctacc ttggggaccc caggggccaa gcagttctcc atctagtcac accaaaggca
3361 aaaagcctgg ctacctcccc cctagcacgt gagtccctac tcccctcccc tctgtttctg
3421 cccagctttg cttattctgg ggatttcagg gcagcagagg gtagtgaggg gagagcagga
3481 gaagcctctg tcctgtatag gcaactgcct gactatgcgg tgactgctgt aaccaagatc
3541 aggtccccag cccttttgtc cattaacacc ccttcttgat ctttcaaagg cagctaattg
3601 ctagcaaatc cccccgattc cggccttttc cctctatttc tttgttagaa gttttctgtg
3661 gagctgaaac ccagcctctg tttgactggg tttcatttag cttagttggg ttcttagagc
3721 cccctgtttg ttgttttgtg ttgtttccaa tgaaaagcaa gtttaccctc agagttgtgc
3781 ttttccaaag aggctgatgt ctttgttttt gtttttttta atgtttcagg ttctaagtga
3841 agtgagttgg ggaggggttg ggagtgttag taatcaaggt ttagaacacc atgagatagt
3901 tacccctgat ctccagtccc tagctggggg ctggacaggg ggaagggaga gaggatttct
3961 attcaccttt aatatatttt tacaaaaaaa gcaaacaatt taaaaacaag cccaccgctt
4021 ctgtacatgt ctaaatatat ttttagaagt gggtaggatt gtgaatttct gatgcagggc
4081 ctttttataa ataggttagg gtagcatcat tcagacttct ctgttgtttt tgtccctgtc
4141 tttttcttat gttgtgttac taatgtaatt tatatttttt ttagatcctc cctttcctat
4201 agagataaaa gtgatttatc ttggc
//